EnhancerDB
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  3. vista30900[chr2:30231247-30231635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30900[chr2:30231247-30231635]
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Tissue distribution of vista30900
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Transcription factor that possibly regulate vista30900[chr2:30231247-30231635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 30231273 30231283 HOXA13 JASPAR yes 22028133
chr2 30231273 30231283 HOXB13 JASPAR yes 22028134
chr2 30231273 30231283 HOXD13 JASPAR yes 22028135
chr2 30231273 30231284 HOXA10 JASPAR yes 22028136
chr2 30231274 30231283 CDX1 JASPAR yes 22028137
chr2 30231274 30231285 CDX2 JASPAR yes 22028138
chr2 30231280 30231284 YY1 TRANSFAC yes 22028139
chr2 30231295 30231300 ETS2 TRANSFAC yes 22028140
chr2 30231305 30231315 NFATC3 JASPAR yes 22028141
chr2 30231307 30231315 FOXO3 JASPAR yes 22028142
chr2 30231354 30231364 EVX1 JASPAR yes 22028143
chr2 30231354 30231364 EVX2 JASPAR yes 22028144
chr2 30231354 30231364 HOXA2 JASPAR yes 22028145
chr2 30231354 30231364 HOXB2 JASPAR yes 22028146
chr2 30231354 30231364 MEOX1 JASPAR yes 22028147
chr2 30231354 30231364 MEOX2 JASPAR yes 22028148
chr2 30231371 30231385 TLX1 JASPAR yes 22028149
chr2 30231372 30231386 TLX1 JASPAR yes 22028150
chr2 30231377 30231388 FOSL2 JASPAR yes 22028151
chr2 30231393 30231413 RREB1 JASPAR yes 22028152
chr2 30231406 30231418 E2F8 JASPAR yes 22028153
chr2 30231408 30231413 TFAP2A TRANSFAC yes 22028154
chr2 30231408 30231414 MZF1 JASPAR yes 22028155
chr2 30231425 30231429 LFA1 TRANSFAC yes 22028156
chr2 30231428 30231447 PAX5 JASPAR yes 22028157
chr2 30231443 30231454 NFKB1 JASPAR yes 22028158
chr2 30231449 30231455 MZF1 JASPAR yes 22028159
chr2 30231479 30231492 SMAD2 JASPAR yes 22028160
chr2 30231482 30231490 MEIS2 JASPAR yes 22028161
chr2 30231482 30231490 MEIS3 JASPAR yes 22028162
chr2 30231483 30231487 NFE TRANSFAC yes 22028163
chr2 30231507 30231513 YY1 JASPAR yes 22028164
chr2 30231513 30231528 TFAP2A JASPAR yes 22028165
chr2 30231519 30231538 CTCF JASPAR yes 22028166
chr2 30231524 30231534 FIGLA JASPAR yes 22028167
chr2 30231524 30231534 TCF3 JASPAR yes 22028168
chr2 30231532 30231540 MEIS2 JASPAR yes 22028169
chr2 30231532 30231540 MEIS3 JASPAR yes 22028170
chr2 30231564 30231585 ZNF263 JASPAR yes 22028171
chr2 30231570 30231588 RARA JASPAR yes 22028172
chr2 30231592 30231604 EHF JASPAR yes 22028173
chr2 30231592 30231605 ELF3 JASPAR yes 22028174
chr2 30231593 30231604 ELF5 JASPAR yes 22028175
chr2 30231595 30231600 ETS2 TRANSFAC yes 22028176
chr2 30231595 30231603 FEV JASPAR yes 22028177
chr2 30231596 30231603 SPI1 JASPAR yes 22028178
chr2 30231610 30231619 THAP1 JASPAR yes 22028179
chr2 30231613 30231617 LFA1 TRANSFAC yes 22028180
chr2 30231623 30231629 ZNF354C JASPAR yes 22028181
chr2 30231625 30231630 GATA2 JASPAR yes 22028182
SNP sites on vista30900[chr2:30231247-30231635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 30231418 rs528582493 G A
E2F8
5617503
chr2 30231528 rs146509281 A C
CTCF FIGLA TCF3 TFAP2A
5617504
chr2 30231558 rs557415013 C G no 5617505
chr2 30231574 rs115788439 A T
RARA ZNF263
5617506
Genes possibly regulated by vista30900[chr2:30231247-30231635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 29415640 30144432 - ALK ENSG00000171094.11 30144432 0.87 0.97 2249 13185
Expression level of Genes
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miRNAs possibly regulated by vista30900[chr2:30231247-30231635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results