EnhancerDB
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  3. vista30905[chr2:30446574-30446684]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30905[chr2:30446574-30446684]
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Tissue distribution of vista30905
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Transcription factor that possibly regulate vista30905[chr2:30446574-30446684]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 30446473 30446726 SPI1 UCSC Txn Factor no Conserved 108431695
chr2 30446568 30446578 TBX21 JASPAR yes 22028313
chr2 30446568 30446578 TBX21 JASPAR yes 72747990
chr2 30446568 30446579 TBX20 JASPAR yes 22028314
chr2 30446568 30446579 TBX2 JASPAR yes 22028315
chr2 30446568 30446579 TBX20 JASPAR yes 72747991
chr2 30446568 30446579 TBX2 JASPAR yes 72747992
chr2 30446568 30446581 EOMES JASPAR yes 22028316
chr2 30446568 30446581 EOMES JASPAR yes 72747993
chr2 30446569 30446577 MGA JASPAR yes 22028317
chr2 30446569 30446577 TBX15 JASPAR yes 22028318
chr2 30446569 30446577 TBX1 JASPAR yes 22028319
chr2 30446569 30446577 TBX4 JASPAR yes 22028320
chr2 30446569 30446577 TBX5 JASPAR yes 22028321
chr2 30446569 30446577 MGA JASPAR yes 72747994
chr2 30446569 30446577 TBX15 JASPAR yes 72747995
chr2 30446569 30446577 TBX1 JASPAR yes 72747996
chr2 30446569 30446577 TBX4 JASPAR yes 72747997
chr2 30446569 30446577 TBX5 JASPAR yes 72747998
chr2 30446569 30446579 TBR1 JASPAR yes 22028322
chr2 30446569 30446579 TBR1 JASPAR yes 72747999
chr2 30446590 30446604 SPI1 JASPAR yes 22028323
chr2 30446590 30446604 SPIC JASPAR yes 22028324
chr2 30446590 30446604 SPI1 JASPAR yes 72748000
chr2 30446590 30446604 SPIC JASPAR yes 72748001
chr2 30446596 30446601 ETS2 TRANSFAC yes 22028325
chr2 30446596 30446601 ETS2 TRANSFAC yes 72748002
chr2 30446606 30446621 HNF4G JASPAR yes 22028326
chr2 30446606 30446621 HNF4G JASPAR yes 72748003
chr2 30446627 30446641 RXRB JASPAR yes 22028327
chr2 30446627 30446641 RXRG JASPAR yes 22028328
chr2 30446627 30446641 RXRB JASPAR yes 72748004
chr2 30446627 30446641 RXRG JASPAR yes 72748005
chr2 30446627 30446642 HNF4G JASPAR yes 22028329
chr2 30446627 30446642 HNF4G JASPAR yes 72748006
chr2 30446633 30446647 RORA JASPAR yes 22028330
chr2 30446633 30446647 RORA JASPAR yes 72748007
chr2 30446634 30446644 RORA JASPAR yes 22028331
chr2 30446634 30446644 RORA JASPAR yes 72748008
chr2 30446641 30446651 TBR1 JASPAR yes 22028332
chr2 30446641 30446651 TBR1 JASPAR yes 72748009
chr2 30446641 30446652 TBX20 JASPAR yes 22028333
chr2 30446641 30446652 TBX20 JASPAR yes 72748010
chr2 30446643 30446646 MYB TRANSFAC yes 22028334
chr2 30446643 30446646 MYB TRANSFAC yes 72748011
chr2 30446660 30446669 ZEB1 JASPAR yes 22028335
chr2 30446660 30446669 ZEB1 JASPAR yes 72748012
chr2 30446661 30446671 TCF4 JASPAR yes 22028336
chr2 30446661 30446671 TCF4 JASPAR yes 72748013
chr2 30446663 30446668 USF2 TRANSFAC yes 22028337
chr2 30446663 30446668 USF2 TRANSFAC yes 72748014
SNP sites on vista30905[chr2:30446574-30446684]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 30446585 rs189795373 G A
SPI1
5619006
chr2 30446684 rs74884428 G A
SPI1
5619007
Genes possibly regulated by vista30905[chr2:30446574-30446684]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 30369807 30383399 + YPEL5 ENSG00000119801.8 30369807 0.66 1.0 2250 23233
chr2 30454397 30546596 + LBH ENSG00000213626.7 30454397 0.84 0.98 2251 92287
Expression level of Genes
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miRNAs possibly regulated by vista30905[chr2:30446574-30446684]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results