EnhancerDB
  1. Home
  2. Enhancers
  3. vista30909[chr2:30458307-30458498]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30909[chr2:30458307-30458498]
Back to top
Tissue distribution of vista30909
Back to top
Transcription factor that possibly regulate vista30909[chr2:30458307-30458498]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 30458346 30458361 RUNX2 JASPAR yes 22028406
chr2 30458346 30458361 RUNX2 JASPAR yes 72748347
chr2 30458352 30458371 REST JASPAR yes 22028407
chr2 30458352 30458371 REST JASPAR yes 72748348
chr2 30458361 30458366 SP1 TRANSFAC yes 22028408
chr2 30458361 30458366 SP1 TRANSFAC yes 72748349
chr2 30458362 30458367 SP1 TRANSFAC yes 22028409
chr2 30458362 30458367 SP1 TRANSFAC yes 72748350
chr2 30458362 30458368 SP1 TRANSFAC yes 22028410
chr2 30458362 30458368 SP1 TRANSFAC yes 72748351
chr2 30458365 30458376 NFKB1 JASPAR yes 22028411
chr2 30458365 30458376 NFKB1 JASPAR yes 72748352
chr2 30458385 30458398 JUN JASPAR yes 22028412
chr2 30458385 30458398 JUN JASPAR yes 72748353
chr2 30458386 30458399 ELF1 JASPAR yes 22028413
chr2 30458386 30458399 ELF1 JASPAR yes 72748354
chr2 30458390 30458398 FEV JASPAR yes 22028414
chr2 30458390 30458398 FEV JASPAR yes 72748355
chr2 30458394 30458405 FOSL2 JASPAR yes 22028415
chr2 30458394 30458405 FOSL2 JASPAR yes 72748356
chr2 30458405 30458416 FOS JASPAR yes 22028416
chr2 30458405 30458416 FOSL1 JASPAR yes 22028417
chr2 30458405 30458416 JUND JASPAR yes 22028418
chr2 30458405 30458416 FOS JASPAR yes 72748357
chr2 30458405 30458416 FOSL1 JASPAR yes 72748358
chr2 30458405 30458416 JUND JASPAR yes 72748359
chr2 30458406 30458417 JUNB JASPAR yes 22028419
chr2 30458406 30458417 JUNB JASPAR yes 72748360
chr2 30458406 30458420 JUN JASPAR yes 22028420
chr2 30458406 30458420 JUN JASPAR yes 72748361
chr2 30458407 30458414 JUN TRANSFAC yes 22028421
chr2 30458407 30458414 JUN TRANSFAC yes 72748362
chr2 30458419 30458437 ESR1 JASPAR yes 22028422
chr2 30458419 30458437 ESR2 JASPAR yes 22028423
chr2 30458419 30458437 ESR1 JASPAR yes 72748363
chr2 30458419 30458437 ESR2 JASPAR yes 72748364
chr2 30458425 30458429 NFE TRANSFAC yes 22028424
chr2 30458425 30458429 NFE TRANSFAC yes 72748365
chr2 30458430 30458433 MYB TRANSFAC yes 22028425
chr2 30458430 30458433 MYB TRANSFAC yes 72748366
chr2 30458452 30458468 ZNF143 JASPAR yes 22028426
chr2 30458452 30458468 ZNF143 JASPAR yes 72748367
SNP sites on vista30909[chr2:30458307-30458498]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 30458366 rs73923292 G A
NFKB1 REST SP1
5619097
chr2 30458413 rs192944712 C G
FOS FOSL1 JUN JUNB JUND
5619098
chr2 30458433 rs369137268 A T
ESR1 ESR2 MYB
5619099
Genes possibly regulated by vista30909[chr2:30458307-30458498]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 30369807 30383399 + YPEL5 ENSG00000119801.8 30369807 0.66 1.0 2250 11500
chr2 30454397 30546596 + LBH ENSG00000213626.7 30454397 0.84 0.98 2251 96090
Expression level of Genes
Back to top
miRNAs possibly regulated by vista30909[chr2:30458307-30458498]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results