EnhancerDB
  1. Home
  2. Enhancers
  3. vista30914[chr2:30571158-30571250]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30914[chr2:30571158-30571250]
Back to top
Tissue distribution of vista30914
Back to top
Transcription factor that possibly regulate vista30914[chr2:30571158-30571250]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 30571150 30571169 PAX5 JASPAR yes 22028620
chr2 30571150 30571169 PAX5 JASPAR yes 72760358
chr2 30571153 30571170 PAX9 JASPAR yes 22028621
chr2 30571153 30571170 PAX9 JASPAR yes 72760359
chr2 30571165 30571177 PKNOX1 JASPAR yes 22028622
chr2 30571165 30571177 PKNOX2 JASPAR yes 22028623
chr2 30571165 30571177 TGIF1 JASPAR yes 22028624
chr2 30571165 30571177 TGIF2 JASPAR yes 22028625
chr2 30571165 30571177 PKNOX1 JASPAR yes 72760360
chr2 30571165 30571177 PKNOX2 JASPAR yes 72760361
chr2 30571165 30571177 TGIF1 JASPAR yes 72760362
chr2 30571165 30571177 TGIF2 JASPAR yes 72760363
chr2 30571166 30571176 TFAP4 JASPAR yes 22028626
chr2 30571166 30571176 TFAP4 JASPAR yes 72760364
chr2 30571169 30571182 ATF4 JASPAR yes 22028627
chr2 30571169 30571182 ATF4 JASPAR yes 72760365
chr2 30571169 30571183 BATF3 JASPAR yes 22028628
chr2 30571169 30571183 BATF3 JASPAR yes 72760366
chr2 30571184 30571188 YY1 TRANSFAC yes 22028629
chr2 30571184 30571188 YY1 TRANSFAC yes 72760367
chr2 30571234 30571245 E2F6 JASPAR yes 22028630
chr2 30571234 30571245 E2F6 JASPAR yes 72760368
chr2 30571243 30571256 EOMES JASPAR yes 22028631
chr2 30571243 30571256 EOMES JASPAR yes 72760369
chr2 30571245 30571255 TBR1 JASPAR yes 22028632
chr2 30571245 30571255 TBR1 JASPAR yes 72760370
chr2 30571245 30571256 TBX20 JASPAR yes 22028633
chr2 30571245 30571256 TBX2 JASPAR yes 22028634
chr2 30571245 30571256 TBX20 JASPAR yes 72760371
chr2 30571245 30571256 TBX2 JASPAR yes 72760372
chr2 30571246 30571256 TBX21 JASPAR yes 22028635
chr2 30571246 30571256 TBX21 JASPAR yes 72760373
chr2 30571247 30571255 MGA JASPAR yes 22028636
chr2 30571247 30571255 MGA JASPAR yes 72760374
SNP sites on vista30914[chr2:30571158-30571250]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 30571182 rs148504695 C T
ATF4 BATF3
5620428
chr2 30571249 rs187429952 C T
EOMES MGA TBR1 TBX2 TBX20 TBX21
5620429
Genes possibly regulated by vista30914[chr2:30571158-30571250]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 30670092 30867091 + LCLAT1 ENSG00000172954.9 30670092 0.66 0.99 2252 1158
Expression level of Genes
Back to top
miRNAs possibly regulated by vista30914[chr2:30571158-30571250]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results