EnhancerDB
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  3. vista3096[chr1:117814674-117814878]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3096[chr1:117814674-117814878]
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Tissue distribution of vista3096
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Transcription factor that possibly regulate vista3096[chr1:117814674-117814878]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117814688 117814708 TP63 JASPAR yes 31870887
chr1 117814688 117814708 TP63 JASPAR yes 118358437
chr1 117814715 117814730 RFX5 JASPAR yes 31870888
chr1 117814715 117814730 RFX5 JASPAR yes 118358438
chr1 117814716 117814721 MYC TRANSFAC yes 31870889
chr1 117814716 117814721 MYC TRANSFAC yes 118358439
chr1 117814726 117814744 NR3C1 JASPAR yes 31870890
chr1 117814726 117814744 NR3C1 JASPAR yes 118358440
chr1 117814742 117814749 SPIB JASPAR yes 31870891
chr1 117814742 117814749 SPIB JASPAR yes 118358441
chr1 117814744 117814759 NFYB JASPAR yes 31870892
chr1 117814744 117814759 NFYB JASPAR yes 118358442
chr1 117814746 117814762 NFYA JASPAR yes 31870893
chr1 117814746 117814762 NFYA JASPAR yes 118358443
chr1 117814747 117814751 NFE TRANSFAC yes 31870894
chr1 117814747 117814751 NFE TRANSFAC yes 118358444
chr1 117814747 117814765 NFYA JASPAR yes 31870895
chr1 117814747 117814765 NFYA JASPAR yes 118358445
chr1 117814751 117814755 H1TF2 TRANSFAC yes 31870896
chr1 117814751 117814755 NFE TRANSFAC yes 31870897
chr1 117814751 117814755 SRF TRANSFAC yes 31870898
chr1 117814751 117814755 H1TF2 TRANSFAC yes 118358446
chr1 117814751 117814755 NFE TRANSFAC yes 118358447
chr1 117814751 117814755 SRF TRANSFAC yes 118358448
chr1 117814790 117814800 TEAD1 JASPAR yes 31870899
chr1 117814790 117814800 TEAD4 JASPAR yes 31870900
chr1 117814790 117814800 TEAD1 JASPAR yes 118358449
chr1 117814790 117814800 TEAD4 JASPAR yes 118358450
chr1 117814792 117814805 POU2F2 JASPAR yes 31870901
chr1 117814792 117814805 POU2F2 JASPAR yes 118358451
chr1 117814811 117814820 SOX9 JASPAR yes 31870902
chr1 117814811 117814820 SOX9 JASPAR yes 118358452
chr1 117814825 117814845 TP53 JASPAR yes 31870903
chr1 117814825 117814845 TP53 JASPAR yes 118358453
chr1 117814827 117814830 MYB TRANSFAC yes 31870904
chr1 117814827 117814830 MYB TRANSFAC yes 118358454
chr1 117814856 117814870 SPI1 JASPAR yes 31870905
chr1 117814856 117814870 SPI1 JASPAR yes 118358455
chr1 117814862 117814869 SPI1 JASPAR yes 31870906
chr1 117814862 117814869 SPI1 JASPAR yes 118358456
chr1 117814864 117814879 RFX5 JASPAR yes 31870907
chr1 117814864 117814879 RFX5 JASPAR yes 118358457
SNP sites on vista3096[chr1:117814674-117814878]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117814689 rs10923256 A G
TP63
594898
chr1 117814728 rs76127827 C T
NR3C1 RFX5
594899
chr1 117814830 rs12563855 A T
MYB TP53
594900
chr1 117814871 rs115170122 G A
RFX5
594901
Genes possibly regulated by vista3096[chr1:117814674-117814878]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117686209 117753556 - VTCN1 ENSG00000134258.12 117753556 0.94 0.99 1069 38882
chr1 117910071 118071494 + MAN1A2 ENSG00000198162.8 117910071 0.77 0.99 1070 4807
Expression level of Genes
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miRNAs possibly regulated by vista3096[chr1:117814674-117814878]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results