EnhancerDB
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  3. vista30970[chr2:36687110-36687380]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30970[chr2:36687110-36687380]
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Tissue distribution of vista30970
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Transcription factor that possibly regulate vista30970[chr2:36687110-36687380]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 36686914 36687355 CTCF UCSC Txn Factor no Conserved 108431751
chr2 36687038 36687274 RAD21 UCSC Txn Factor no Conserved 108431752
chr2 36687105 36687200 SMC3 UCSC Txn Factor no Conserved 108431753
chr2 36687115 36687123 FOXC1 JASPAR yes 22030783
chr2 36687115 36687123 FOXC1 JASPAR yes 73009496
chr2 36687121 36687126 SP1 TRANSFAC yes 22030784
chr2 36687121 36687126 SP1 TRANSFAC yes 73009497
chr2 36687126 36687144 MAFF JASPAR yes 22030785
chr2 36687126 36687144 MAFF JASPAR yes 73009498
chr2 36687127 36687142 MAFK JASPAR yes 22030786
chr2 36687127 36687142 MAFK JASPAR yes 73009499
chr2 36687127 36687145 ESR1 JASPAR yes 22030787
chr2 36687127 36687145 ESR1 JASPAR yes 73009500
chr2 36687131 36687142 NRL JASPAR yes 22030788
chr2 36687131 36687142 NRL JASPAR yes 73009501
chr2 36687155 36687174 CTCF JASPAR yes 22030789
chr2 36687155 36687174 CTCF JASPAR yes 73009502
chr2 36687166 36687177 NFKB1 JASPAR yes 22030790
chr2 36687166 36687177 NFKB1 JASPAR yes 73009503
chr2 36687169 36687185 RFX2 JASPAR yes 22030791
chr2 36687169 36687185 RFX3 JASPAR yes 22030792
chr2 36687169 36687185 RFX4 JASPAR yes 22030793
chr2 36687169 36687185 RFX2 JASPAR yes 73009504
chr2 36687169 36687185 RFX3 JASPAR yes 73009505
chr2 36687169 36687185 RFX4 JASPAR yes 73009506
chr2 36687178 36687183 H4TF1 TRANSFAC yes 22030794
chr2 36687178 36687183 H4TF1 TRANSFAC yes 73009507
chr2 36687190 36687199 SOX9 JASPAR yes 22030795
chr2 36687190 36687199 SOX9 JASPAR yes 73009508
chr2 36687211 36687220 HIC2 JASPAR yes 22030796
chr2 36687211 36687220 HIC2 JASPAR yes 73009509
chr2 36687231 36687235 YY1 TRANSFAC yes 22030797
chr2 36687231 36687235 YY1 TRANSFAC yes 73009510
chr2 36687240 36687255 FOXP1 JASPAR yes 22030798
chr2 36687240 36687255 FOXP1 JASPAR yes 73009511
chr2 36687246 36687261 FOXP1 JASPAR yes 22030799
chr2 36687246 36687261 FOXP1 JASPAR yes 73009512
chr2 36687270 36687289 PAX5 JASPAR yes 22030800
chr2 36687270 36687289 PAX5 JASPAR yes 73009513
chr2 36687271 36687279 TBX15 JASPAR yes 22030801
chr2 36687271 36687279 TBX15 JASPAR yes 73009514
chr2 36687271 36687280 ZEB1 JASPAR yes 22030802
chr2 36687271 36687280 ZEB1 JASPAR yes 73009515
chr2 36687272 36687282 TCF4 JASPAR yes 22030803
chr2 36687272 36687282 TCF4 JASPAR yes 73009516
chr2 36687274 36687279 USF2 TRANSFAC yes 22030804
chr2 36687274 36687279 USF2 TRANSFAC yes 73009517
chr2 36687282 36687292 NHLH1 JASPAR yes 22030805
chr2 36687282 36687292 NHLH1 JASPAR yes 73009518
chr2 36687282 36687297 RUNX2 JASPAR yes 22030806
chr2 36687282 36687297 RUNX2 JASPAR yes 73009519
chr2 36687285 36687296 RUNX1 JASPAR yes 22030807
chr2 36687285 36687296 RUNX1 JASPAR yes 73009520
chr2 36687287 36687296 RUNX2 JASPAR yes 22030808
chr2 36687287 36687296 RUNX2 JASPAR yes 73009521
chr2 36687289 36687300 DMRT3 JASPAR yes 22030809
chr2 36687289 36687300 DMRT3 JASPAR yes 73009522
chr2 36687291 36687303 TEF JASPAR yes 22030810
chr2 36687291 36687303 TEF JASPAR yes 73009523
chr2 36687296 36687300 YY1 TRANSFAC yes 22030811
chr2 36687296 36687300 YY1 TRANSFAC yes 73009524
chr2 36687297 36687309 POU2F1 JASPAR yes 22030812
chr2 36687297 36687309 POU2F1 JASPAR yes 73009525
chr2 36687297 36687310 POU3F3 JASPAR yes 22030813
chr2 36687297 36687310 POU3F3 JASPAR yes 73009526
chr2 36687298 36687310 POU3F1 JASPAR yes 22030814
chr2 36687298 36687310 POU3F2 JASPAR yes 22030815
chr2 36687298 36687310 POU3F1 JASPAR yes 73009527
chr2 36687298 36687310 POU3F2 JASPAR yes 73009528
chr2 36687298 36687311 POU2F2 JASPAR yes 22030816
chr2 36687298 36687311 POU2F2 JASPAR yes 73009529
chr2 36687299 36687308 POU3F4 JASPAR yes 22030817
chr2 36687299 36687308 POU5F1B JASPAR yes 22030818
chr2 36687299 36687308 POU3F4 JASPAR yes 73009530
chr2 36687299 36687308 POU5F1B JASPAR yes 73009531
chr2 36687335 36687339 YY1 TRANSFAC yes 22030819
chr2 36687335 36687339 YY1 TRANSFAC yes 73009532
chr2 36687343 36687346 MYB TRANSFAC yes 22030820
chr2 36687343 36687346 MYB TRANSFAC yes 73009533
chr2 36687351 36687364 DUXA JASPAR yes 22030821
chr2 36687351 36687364 DUXA JASPAR yes 73009534
chr2 36687358 36687362 YY1 TRANSFAC yes 22030822
chr2 36687358 36687362 YY1 TRANSFAC yes 73009535
chr2 36687370 36687374 YY1 TRANSFAC yes 22030823
chr2 36687370 36687374 YY1 TRANSFAC yes 73009536
SNP sites on vista30970[chr2:36687110-36687380]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 36687111 rs888077 A G
CTCF RAD21 SMC3
5646384
chr2 36687122 rs3770870 C T
CTCF FOXC1 RAD21 SMC3 SP1
5646385
chr2 36687146 rs114908769 C T
CTCF RAD21 SMC3
5646386
chr2 36687193 rs183830634 A G
CTCF RAD21 SMC3 SOX9
5646387
chr2 36687249 rs116595906 A G
CTCF FOXP1 RAD21
5646388
chr2 36687254 rs72865069 A G
CTCF FOXP1 RAD21
5646389
chr2 36687299 rs147786756 T TTA
CTCF DMRT3 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B TEF YY1
5646390
chr2 36687299 rs371192937 T TTA
CTCF DMRT3 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B TEF YY1
5646391
chr2 36687349 rs148542839 C CT
CTCF
5646392
chr2 36687360 rs115982855 A G
DUXA YY1
5646393
Genes possibly regulated by vista30970[chr2:36687110-36687380]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 36758948 36779411 - AC007401.2 ENSG00000217075.1 36779411 0.78 0.94 2270 7969
Expression level of Genes
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miRNAs possibly regulated by vista30970[chr2:36687110-36687380]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results