EnhancerDB
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  3. vista3100[chr1:118185712-118185829]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3100[chr1:118185712-118185829]
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Tissue distribution of vista3100
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Transcription factor that possibly regulate vista3100[chr1:118185712-118185829]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 118185667 118185907 EGR1 UCSC Txn Factor no Conserved 107825286
chr1 118185712 118185889 TEAD4 UCSC Txn Factor no Conserved 107825291
chr1 118185725 118185729 TEAD2 TRANSFAC yes 31888480
chr1 118185725 118185729 TEAD2 TRANSFAC yes 118358556
chr1 118185727 118185730 MYB TRANSFAC yes 31888481
chr1 118185727 118185730 MYB TRANSFAC yes 118358557
chr1 118185741 118185753 PROX1 JASPAR yes 31888482
chr1 118185741 118185753 PROX1 JASPAR yes 118358558
chr1 118185754 118185769 RUNX2 JASPAR yes 31888483
chr1 118185754 118185769 RUNX2 JASPAR yes 118358559
chr1 118185757 118185768 RUNX1 JASPAR yes 31888484
chr1 118185757 118185768 RUNX1 JASPAR yes 118358560
chr1 118185758 118185768 RUNX3 JASPAR yes 31888485
chr1 118185758 118185768 RUNX3 JASPAR yes 118358561
chr1 118185759 118185768 RUNX2 JASPAR yes 31888486
chr1 118185759 118185768 RUNX2 JASPAR yes 118358562
chr1 118185769 118185773 NFE TRANSFAC yes 31888487
chr1 118185769 118185773 NFE TRANSFAC yes 118358563
chr1 118185773 118185778 SP1 TRANSFAC yes 31888488
chr1 118185773 118185778 SP1 TRANSFAC yes 118358564
chr1 118185773 118185779 SP1 TRANSFAC yes 31888489
chr1 118185773 118185779 SP1 TRANSFAC yes 118358565
chr1 118185773 118185780 SP1 TRANSFAC yes 31888490
chr1 118185773 118185780 SP1 TRANSFAC yes 118358566
chr1 118185792 118185798 TCF1 TRANSFAC yes 31888491
chr1 118185792 118185798 TCF1 TRANSFAC yes 118358567
chr1 118185820 118185834 ZIC1 JASPAR yes 31888492
chr1 118185820 118185834 ZIC1 JASPAR yes 118358568
SNP sites on vista3100[chr1:118185712-118185829]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 118185775 rs150013355 C A,T
EGR1 SP1 TEAD4
596645
chr1 118185790 rs144226169 G T
EGR1 TEAD4
596646
chr1 118185818 rs10923364 T G
EGR1 TEAD4
596647
Genes possibly regulated by vista3100[chr1:118185712-118185829]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 118148556 118170994 + FAM46C ENSG00000183508.4 118148556 0.85 0.98 1071 62844
Expression level of Genes
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miRNAs possibly regulated by vista3100[chr1:118185712-118185829]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results