EnhancerDB
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  3. vista31067[chr2:38120007-38120217]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31067[chr2:38120007-38120217]
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Tissue distribution of vista31067
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Transcription factor that possibly regulate vista31067[chr2:38120007-38120217]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 38119864 38120174 RUNX3 UCSC Txn Factor no Conserved 108431869
chr2 38119946 38120205 SPI1 UCSC Txn Factor no Conserved 108431870
chr2 38119995 38120225 SRF UCSC Txn Factor no Conserved 108431871
chr2 38120001 38120016 RUNX2 JASPAR yes 22035833
chr2 38120001 38120016 RUNX2 JASPAR yes 73096514
chr2 38120010 38120014 ESR1 TRANSFAC yes 22035834
chr2 38120010 38120014 ESR1 TRANSFAC yes 73096515
chr2 38120025 38120046 IRF1 JASPAR yes 22035835
chr2 38120025 38120046 IRF1 JASPAR yes 73096516
chr2 38120029 38120044 STAT2 JASPAR yes 22035836
chr2 38120029 38120044 STAT2 JASPAR yes 73096517
chr2 38120049 38120064 MEF2C JASPAR yes 22035837
chr2 38120049 38120064 MEF2C JASPAR yes 73096518
chr2 38120050 38120065 MEF2A JASPAR yes 22035838
chr2 38120050 38120065 MEF2A JASPAR yes 73096519
chr2 38120050 38120071 IRF1 JASPAR yes 22035839
chr2 38120050 38120071 IRF1 JASPAR yes 73096520
chr2 38120054 38120068 SPI1 JASPAR yes 22035840
chr2 38120054 38120068 SPIC JASPAR yes 22035841
chr2 38120054 38120068 SPI1 JASPAR yes 73096521
chr2 38120054 38120068 SPIC JASPAR yes 73096522
chr2 38120054 38120069 STAT2 JASPAR yes 22035842
chr2 38120054 38120069 STAT2 JASPAR yes 73096523
chr2 38120058 38120068 ERF JASPAR yes 22035843
chr2 38120058 38120068 ERF JASPAR yes 73096524
chr2 38120060 38120067 SPI1 JASPAR yes 22035844
chr2 38120060 38120067 SPI1 JASPAR yes 73096525
chr2 38120063 38120073 TBR1 JASPAR yes 22035845
chr2 38120063 38120073 TBR1 JASPAR yes 73096526
chr2 38120079 38120097 TP63 JASPAR yes 22035846
chr2 38120079 38120097 TP63 JASPAR yes 73096527
chr2 38120099 38120117 SRF JASPAR yes 22035847
chr2 38120099 38120117 SRF JASPAR yes 73096528
chr2 38120105 38120109 YY1 TRANSFAC yes 22035848
chr2 38120105 38120109 YY1 TRANSFAC yes 73096529
chr2 38120116 38120137 MAFG JASPAR yes 22035849
chr2 38120116 38120137 MAFG JASPAR yes 73096530
chr2 38120121 38120139 MAFF JASPAR yes 22035850
chr2 38120121 38120139 MAFF JASPAR yes 73096531
chr2 38120122 38120137 MAFK JASPAR yes 22035851
chr2 38120122 38120137 MAFK JASPAR yes 73096532
chr2 38120122 38120138 SOX8 JASPAR yes 22035852
chr2 38120122 38120138 SOX8 JASPAR yes 73096533
chr2 38120158 38120174 NFYA JASPAR yes 22035853
chr2 38120158 38120174 NFYA JASPAR yes 73096534
chr2 38120163 38120168 NFY TRANSFAC yes 22035854
chr2 38120163 38120168 NFY TRANSFAC yes 73096535
chr2 38120187 38120196 SNAI2 JASPAR yes 22035855
chr2 38120187 38120196 SNAI2 JASPAR yes 73096536
chr2 38120187 38120197 ID4 JASPAR yes 22035856
chr2 38120187 38120197 TCF3 JASPAR yes 22035857
chr2 38120187 38120197 TCF4 JASPAR yes 22035858
chr2 38120187 38120197 ID4 JASPAR yes 73096537
chr2 38120187 38120197 TCF3 JASPAR yes 73096538
chr2 38120187 38120197 TCF4 JASPAR yes 73096539
chr2 38120201 38120211 HMBOX1 JASPAR yes 22035859
chr2 38120201 38120211 HMBOX1 JASPAR yes 73096540
SNP sites on vista31067[chr2:38120007-38120217]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 38120098 rs536100586 G A,C
RUNX3 SPI1 SRF
5656481
Genes possibly regulated by vista31067[chr2:38120007-38120217]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 38150330 38294285 + RMDN2 ENSG00000115841.15 38150330 0.76 0.97 2285 69887
Expression level of Genes
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miRNAs possibly regulated by vista31067[chr2:38120007-38120217]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results