EnhancerDB
  1. Home
  2. Enhancers
  3. vista3112[chr1:118678137-118678411]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3112[chr1:118678137-118678411]
Back to top
Tissue distribution of vista3112
Back to top
Transcription factor that possibly regulate vista3112[chr1:118678137-118678411]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 118678134 118678137 MYB TRANSFAC yes 31909467
chr1 118678134 118678137 MYB TRANSFAC yes 118359165
chr1 118678136 118678156 RREB1 JASPAR yes 31909468
chr1 118678136 118678156 RREB1 JASPAR yes 118359166
chr1 118678164 118678173 NKX3-2 JASPAR yes 31909469
chr1 118678164 118678173 NKX3-2 JASPAR yes 118359167
chr1 118678186 118678198 POU3F2 JASPAR yes 31909470
chr1 118678186 118678198 POU3F2 JASPAR yes 118359168
chr1 118678187 118678198 PHOX2A JASPAR yes 31909471
chr1 118678187 118678198 PROP1 JASPAR yes 31909472
chr1 118678187 118678198 PHOX2A JASPAR yes 118359169
chr1 118678187 118678198 PROP1 JASPAR yes 118359170
chr1 118678200 118678216 SOX8 JASPAR yes 31909473
chr1 118678200 118678216 SOX8 JASPAR yes 118359171
chr1 118678206 118678227 IRF1 JASPAR yes 31909474
chr1 118678206 118678227 IRF1 JASPAR yes 118359172
chr1 118678209 118678213 YY1 TRANSFAC yes 31909475
chr1 118678209 118678213 YY1 TRANSFAC yes 118359173
chr1 118678210 118678222 IRF1 JASPAR yes 31909476
chr1 118678210 118678222 IRF1 JASPAR yes 118359174
chr1 118678210 118678224 IRF7 JASPAR yes 31909477
chr1 118678210 118678224 IRF7 JASPAR yes 118359175
chr1 118678214 118678229 PRDM1 JASPAR yes 31909478
chr1 118678214 118678229 PRDM1 JASPAR yes 118359176
chr1 118678215 118678219 YY1 TRANSFAC yes 31909479
chr1 118678215 118678219 YY1 TRANSFAC yes 118359177
chr1 118678242 118678246 YY1 TRANSFAC yes 31909480
chr1 118678242 118678246 YY1 TRANSFAC yes 118359178
chr1 118678244 118678264 TBX19 JASPAR yes 31909481
chr1 118678244 118678264 TBX19 JASPAR yes 118359179
chr1 118678265 118678269 ESR1 TRANSFAC yes 31909482
chr1 118678265 118678269 ESR1 TRANSFAC yes 118359180
chr1 118678298 118678303 TFAP2A TRANSFAC yes 31909483
chr1 118678298 118678303 TFAP2A TRANSFAC yes 118359181
chr1 118678298 118678304 MZF1 JASPAR yes 31909484
chr1 118678298 118678304 MZF1 JASPAR yes 118359182
chr1 118678306 118678317 BATF JASPAR yes 31909485
chr1 118678306 118678317 BATF JASPAR yes 118359183
chr1 118678310 118678316 JUN TRANSFAC yes 31909486
chr1 118678310 118678316 JUN TRANSFAC yes 118359184
chr1 118678317 118678328 HOXC12 JASPAR yes 31909487
chr1 118678317 118678328 HOXC13 JASPAR yes 31909488
chr1 118678317 118678328 HOXC12 JASPAR yes 118359185
chr1 118678317 118678328 HOXC13 JASPAR yes 118359186
chr1 118678368 118678378 NFIA JASPAR yes 31909489
chr1 118678368 118678378 NFIA JASPAR yes 118359187
chr1 118678369 118678378 NFIX JASPAR yes 31909490
chr1 118678369 118678378 NFIX JASPAR yes 118359188
chr1 118678370 118678376 NFIC JASPAR yes 31909491
chr1 118678370 118678376 NFIC JASPAR yes 118359189
chr1 118678370 118678384 TLX1 JASPAR yes 31909492
chr1 118678370 118678384 TLX1 JASPAR yes 118359190
SNP sites on vista3112[chr1:118678137-118678411]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3112[chr1:118678137-118678411]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 118496484 118727846 - SPAG17 ENSG00000155761.9 118727846 0.92 1.0 1074 50565
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3112[chr1:118678137-118678411]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results