EnhancerDB
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  3. vista31138[chr2:39390817-39391081]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31138[chr2:39390817-39391081]
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Tissue distribution of vista31138
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Transcription factor that possibly regulate vista31138[chr2:39390817-39391081]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 39390817 39390832 FOXP1 JASPAR yes 22039175
chr2 39390818 39390833 FOXP1 JASPAR yes 22039176
chr2 39390840 39390859 PAX5 JASPAR yes 22039177
chr2 39390848 39390852 NFE TRANSFAC yes 22039178
chr2 39390882 39390899 ESR1 JASPAR yes 22039179
chr2 39390903 39390916 ZBTB18 JASPAR yes 22039180
chr2 39390905 39390914 SNAI2 JASPAR yes 22039181
chr2 39390905 39390915 FIGLA JASPAR yes 22039182
chr2 39390905 39390915 ID4 JASPAR yes 22039183
chr2 39390905 39390915 TCF3 JASPAR yes 22039184
chr2 39390905 39390915 TCF4 JASPAR yes 22039185
chr2 39390907 39390916 ZEB1 JASPAR yes 22039186
chr2 39390908 39390916 TBX5 JASPAR yes 22039187
chr2 39390955 39390968 NFKB1 JASPAR yes 22039188
chr2 39390955 39390968 NFKB2 JASPAR yes 22039189
chr2 39390958 39390969 CEBPB JASPAR yes 22039190
chr2 39390961 39390973 YY1 JASPAR yes 22039191
chr2 39390971 39390991 ESR1 JASPAR yes 22039192
chr2 39390983 39391001 RARA JASPAR yes 22039193
chr2 39390990 39391003 NR2F1 JASPAR yes 22039194
chr2 39390994 39391002 CREB1 JASPAR yes 22039195
chr2 39391006 39391012 ZNF354C JASPAR yes 22039196
chr2 39391011 39391025 PLAG1 JASPAR yes 22039197
chr2 39391040 39391049 SNAI2 JASPAR yes 22039198
chr2 39391040 39391050 FIGLA JASPAR yes 22039199
chr2 39391040 39391050 TCF3 JASPAR yes 22039200
chr2 39391040 39391050 TCF4 JASPAR yes 22039201
chr2 39391042 39391051 ZEB1 JASPAR yes 22039202
chr2 39391044 39391049 SP1 TRANSFAC yes 22039203
chr2 39391044 39391053 HIC2 JASPAR yes 22039204
chr2 39391047 39391051 LFA1 TRANSFAC yes 22039205
SNP sites on vista31138[chr2:39390817-39391081]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 39390853 rs181777191 C T
PAX5
5666646
chr2 39390866 rs572830220 G C no 5666647
chr2 39390999 rs530920443 C T
CREB1 NR2F1 RARA
5666648
chr2 39391049 rs62142844 G T
FIGLA HIC2 LFA1 SNAI2 SP1 TCF3 TCF4 ZEB1
5666649
Genes possibly regulated by vista31138[chr2:39390817-39391081]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 39208537 39351486 - SOS1 ENSG00000115904.8 39351486 0.71 0.99 2296 60669
chr2 39402787 39456729 - CDKL4 ENSG00000205111.4 39456729 0.94 0.86 2297 34352
Expression level of Genes
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miRNAs possibly regulated by vista31138[chr2:39390817-39391081]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results