EnhancerDB
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  3. vista31139[chr2:39443973-39444333]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31139[chr2:39443973-39444333]
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Tissue distribution of vista31139
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Transcription factor that possibly regulate vista31139[chr2:39443973-39444333]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 39443942 39444443 E2F1 UCSC Txn Factor no Conserved 108431917
chr2 39444032 39444314 RUNX3 UCSC Txn Factor no Conserved 108431918
chr2 39444095 39444291 FOXA1 UCSC Txn Factor no Conserved 108431919
chr2 39444022 39444025 MYB TRANSFAC yes 22039206
chr2 39444022 39444025 MYB TRANSFAC yes 73190380
chr2 39444022 39444036 TCF7L2 JASPAR yes 22039207
chr2 39444022 39444036 TCF7L2 JASPAR yes 73190381
chr2 39444022 39444037 LEF1 JASPAR yes 22039208
chr2 39444022 39444037 LEF1 JASPAR yes 73190382
chr2 39444026 39444032 TCF4 TRANSFAC yes 22039209
chr2 39444026 39444032 TCF4 TRANSFAC yes 73190383
chr2 39444027 39444041 SPI1 JASPAR yes 22039210
chr2 39444027 39444041 SPIC JASPAR yes 22039211
chr2 39444027 39444041 SPI1 JASPAR yes 73190384
chr2 39444027 39444041 SPIC JASPAR yes 73190385
chr2 39444032 39444039 PEA3 TRANSFAC yes 22039212
chr2 39444032 39444039 PEA3 TRANSFAC yes 73190386
chr2 39444050 39444063 ELF1 JASPAR yes 22039213
chr2 39444050 39444063 ELF1 JASPAR yes 73190387
chr2 39444051 39444063 ELF4 JASPAR yes 22039214
chr2 39444051 39444063 ELF4 JASPAR yes 73190388
chr2 39444052 39444063 ETV2 JASPAR yes 22039215
chr2 39444052 39444063 ETV2 JASPAR yes 73190389
chr2 39444053 39444063 ELK1 JASPAR yes 22039216
chr2 39444053 39444063 ELK3 JASPAR yes 22039217
chr2 39444053 39444063 ERF JASPAR yes 22039218
chr2 39444053 39444063 ERG JASPAR yes 22039219
chr2 39444053 39444063 ETS1 JASPAR yes 22039220
chr2 39444053 39444063 ETV1 JASPAR yes 22039221
chr2 39444053 39444063 ETV3 JASPAR yes 22039222
chr2 39444053 39444063 ETV4 JASPAR yes 22039223
chr2 39444053 39444063 ETV6 JASPAR yes 22039224
chr2 39444053 39444063 FEV JASPAR yes 22039225
chr2 39444053 39444063 FLI1 JASPAR yes 22039226
chr2 39444053 39444063 GABPA JASPAR yes 22039227
chr2 39444053 39444063 ELK1 JASPAR yes 73190390
chr2 39444053 39444063 ELK3 JASPAR yes 73190391
chr2 39444053 39444063 ERF JASPAR yes 73190392
chr2 39444053 39444063 ERG JASPAR yes 73190393
chr2 39444053 39444063 ETS1 JASPAR yes 73190394
chr2 39444053 39444063 ETV1 JASPAR yes 73190395
chr2 39444053 39444063 ETV3 JASPAR yes 73190396
chr2 39444053 39444063 ETV4 JASPAR yes 73190397
chr2 39444053 39444063 ETV6 JASPAR yes 73190398
chr2 39444053 39444063 FEV JASPAR yes 73190399
chr2 39444053 39444063 FLI1 JASPAR yes 73190400
chr2 39444053 39444063 GABPA JASPAR yes 73190401
chr2 39444053 39444064 ELK4 JASPAR yes 22039228
chr2 39444053 39444064 FLI1 JASPAR yes 22039229
chr2 39444053 39444064 ELK4 JASPAR yes 73190402
chr2 39444053 39444064 FLI1 JASPAR yes 73190403
chr2 39444054 39444062 EHF JASPAR yes 22039230
chr2 39444054 39444062 FEV JASPAR yes 22039231
chr2 39444054 39444062 EHF JASPAR yes 73190404
chr2 39444054 39444062 FEV JASPAR yes 73190405
chr2 39444055 39444062 SPI1 JASPAR yes 22039232
chr2 39444055 39444062 SPI1 JASPAR yes 73190406
chr2 39444080 39444095 STAT1 JASPAR yes 22039233
chr2 39444080 39444095 STAT1 JASPAR yes 73190407
chr2 39444082 39444093 STAT1 JASPAR yes 22039234
chr2 39444082 39444093 STAT3 JASPAR yes 22039235
chr2 39444082 39444093 STAT1 JASPAR yes 73190408
chr2 39444082 39444093 STAT3 JASPAR yes 73190409
chr2 39444107 39444111 LFA1 TRANSFAC yes 22039236
chr2 39444107 39444111 LFA1 TRANSFAC yes 73190410
chr2 39444110 39444122 IRF1 JASPAR yes 22039237
chr2 39444110 39444122 IRF1 JASPAR yes 73190411
chr2 39444113 39444128 SOX21 JASPAR yes 22039238
chr2 39444113 39444128 SOX21 JASPAR yes 73190412
chr2 39444130 39444136 TCF4 TRANSFAC yes 22039239
chr2 39444130 39444136 TCF4 TRANSFAC yes 73190413
chr2 39444140 39444146 GATA3 JASPAR yes 22039240
chr2 39444140 39444146 GATA3 JASPAR yes 73190414
chr2 39444144 39444158 TCF7L2 JASPAR yes 22039241
chr2 39444144 39444158 TCF7L2 JASPAR yes 73190415
chr2 39444144 39444159 LEF1 JASPAR yes 22039242
chr2 39444144 39444159 LEF1 JASPAR yes 73190416
chr2 39444145 39444151 YY1 JASPAR yes 22039243
chr2 39444145 39444151 YY1 JASPAR yes 73190417
chr2 39444155 39444170 RUNX2 JASPAR yes 22039244
chr2 39444155 39444170 RUNX2 JASPAR yes 73190418
chr2 39444156 39444167 RUNX1 JASPAR yes 22039245
chr2 39444156 39444167 RUNX1 JASPAR yes 73190419
chr2 39444156 39444172 ZNF143 JASPAR yes 22039246
chr2 39444156 39444172 ZNF143 JASPAR yes 73190420
chr2 39444159 39444179 RREB1 JASPAR yes 22039247
chr2 39444159 39444179 RREB1 JASPAR yes 73190421
chr2 39444162 39444174 IRF1 JASPAR yes 22039248
chr2 39444162 39444174 IRF1 JASPAR yes 73190422
chr2 39444168 39444183 RUNX2 JASPAR yes 22039249
chr2 39444168 39444183 RUNX2 JASPAR yes 73190423
chr2 39444182 39444188 TCF4 TRANSFAC yes 22039250
chr2 39444182 39444188 TCF4 TRANSFAC yes 73190424
chr2 39444190 39444204 GATA2 JASPAR yes 22039251
chr2 39444190 39444204 GATA2 JASPAR yes 73190425
chr2 39444195 39444198 MYB TRANSFAC yes 22039252
chr2 39444195 39444198 MYB TRANSFAC yes 73190426
chr2 39444196 39444210 TCF7L2 JASPAR yes 22039253
chr2 39444196 39444210 TCF7L2 JASPAR yes 73190427
chr2 39444196 39444211 LEF1 JASPAR yes 22039254
chr2 39444196 39444211 LEF1 JASPAR yes 73190428
chr2 39444206 39444221 FOXA1 JASPAR yes 22039255
chr2 39444206 39444221 FOXA1 JASPAR yes 73190429
chr2 39444240 39444246 GATA3 JASPAR yes 22039256
chr2 39444240 39444246 GATA3 JASPAR yes 73190430
chr2 39444256 39444270 PLAG1 JASPAR yes 22039257
chr2 39444256 39444270 PLAG1 JASPAR yes 73190431
chr2 39444264 39444275 TFAP2C JASPAR yes 22039258
chr2 39444264 39444275 TFAP2C JASPAR yes 73190432
chr2 39444266 39444284 MAFF JASPAR yes 22039259
chr2 39444266 39444284 MAFF JASPAR yes 73190433
chr2 39444276 39444280 YY1 TRANSFAC yes 22039260
chr2 39444276 39444280 YY1 TRANSFAC yes 73190434
chr2 39444281 39444287 TCF1 TRANSFAC yes 22039261
chr2 39444281 39444287 TCF1 TRANSFAC yes 73190435
chr2 39444281 39444288 TCF4 TRANSFAC yes 22039262
chr2 39444281 39444288 TCF4 TRANSFAC yes 73190436
chr2 39444309 39444320 CEBPA JASPAR yes 22039263
chr2 39444309 39444320 CEBPA JASPAR yes 73190437
chr2 39444322 39444338 SOX8 JASPAR yes 22039264
chr2 39444322 39444338 SOX8 JASPAR yes 73190438
SNP sites on vista31139[chr2:39443973-39444333]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 39444129 rs369417139 C T
E2F1 FOXA1 RUNX3
5666769
chr2 39444142 rs111367281 G C
E2F1 FOXA1 GATA3 RUNX3
5666770
chr2 39444182 rs183307846 G A
E2F1 FOXA1 RUNX2 RUNX3 TCF4
5666771
chr2 39444198 rs554972724 A G
E2F1 FOXA1 GATA2 LEF1 MYB RUNX3 TCF7L2
5666772
chr2 39444228 rs138379969 G A
E2F1 FOXA1 RUNX3
5666773
chr2 39444235 rs12712633 C G
E2F1 FOXA1 RUNX3
5666774
chr2 39444244 rs57794248 T C
E2F1 FOXA1 GATA3 RUNX3
5666775
chr2 39444278 rs185681875 A G
E2F1 FOXA1 MAFF RUNX3 YY1
5666776
Genes possibly regulated by vista31139[chr2:39443973-39444333]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 39208537 39351486 - SOS1 ENSG00000115904.8 39351486 0.71 0.99 2296 7513
chr2 39402787 39456729 - CDKL4 ENSG00000205111.4 39456729 0.94 0.86 2297 87604
Expression level of Genes
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miRNAs possibly regulated by vista31139[chr2:39443973-39444333]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results