EnhancerDB
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  3. vista31164[chr2:40509736-40509978]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31164[chr2:40509736-40509978]
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Tissue distribution of vista31164
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Transcription factor that possibly regulate vista31164[chr2:40509736-40509978]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 40509739 40509757 IRF2 JASPAR yes 22040376
chr2 40509739 40509757 IRF2 JASPAR yes 73258842
chr2 40509740 40509756 SOX4 JASPAR yes 22040377
chr2 40509740 40509756 SOX4 JASPAR yes 73258843
chr2 40509740 40509761 IRF1 JASPAR yes 22040378
chr2 40509740 40509761 IRF1 JASPAR yes 73258844
chr2 40509742 40509757 PRDM1 JASPAR yes 22040379
chr2 40509742 40509757 STAT2 JASPAR yes 22040380
chr2 40509742 40509757 PRDM1 JASPAR yes 73258845
chr2 40509742 40509757 STAT2 JASPAR yes 73258846
chr2 40509743 40509757 STAT1 JASPAR yes 22040381
chr2 40509743 40509757 STAT1 JASPAR yes 73258847
chr2 40509744 40509756 IRF1 JASPAR yes 22040382
chr2 40509744 40509756 IRF1 JASPAR yes 73258848
chr2 40509744 40509758 IRF7 JASPAR yes 22040383
chr2 40509744 40509758 IRF8 JASPAR yes 22040384
chr2 40509744 40509758 IRF7 JASPAR yes 73258849
chr2 40509744 40509758 IRF8 JASPAR yes 73258850
chr2 40509744 40509759 IRF9 JASPAR yes 22040385
chr2 40509744 40509759 IRF9 JASPAR yes 73258851
chr2 40509749 40509753 YY1 TRANSFAC yes 22040386
chr2 40509749 40509753 YY1 TRANSFAC yes 73258852
chr2 40509764 40509770 TCF4 TRANSFAC yes 22040387
chr2 40509764 40509770 TCF4 TRANSFAC yes 73258853
chr2 40509770 40509780 BARHL2 JASPAR yes 22040388
chr2 40509770 40509780 BARHL2 JASPAR yes 73258854
chr2 40509785 40509796 FOXC1 JASPAR yes 22040389
chr2 40509785 40509796 FOXC1 JASPAR yes 73258855
chr2 40509788 40509802 SPIC JASPAR yes 22040390
chr2 40509788 40509802 SPIC JASPAR yes 73258856
chr2 40509793 40509807 XBP1 JASPAR yes 22040391
chr2 40509793 40509807 XBP1 JASPAR yes 73258857
chr2 40509795 40509800 ATF1 TRANSFAC yes 22040392
chr2 40509795 40509800 ATF1 TRANSFAC yes 73258858
chr2 40509808 40509813 SP1 TRANSFAC yes 22040393
chr2 40509808 40509813 SP1 TRANSFAC yes 73258859
chr2 40509808 40509815 SP1 TRANSFAC yes 22040394
chr2 40509808 40509815 SP1 TRANSFAC yes 73258860
chr2 40509808 40509818 SP1 JASPAR yes 22040395
chr2 40509808 40509818 SP1 JASPAR yes 73258861
chr2 40509816 40509822 PEA3 TRANSFAC yes 22040396
chr2 40509816 40509822 PEA3 TRANSFAC yes 73258862
chr2 40509831 40509844 ELF3 JASPAR yes 22040397
chr2 40509831 40509844 ELF3 JASPAR yes 73258863
chr2 40509833 40509844 FLI1 JASPAR yes 22040398
chr2 40509833 40509844 FLI1 JASPAR yes 73258864
chr2 40509834 40509842 FEV JASPAR yes 22040399
chr2 40509834 40509842 FEV JASPAR yes 73258865
chr2 40509842 40509857 STAT1 JASPAR yes 22040400
chr2 40509842 40509857 STAT1 JASPAR yes 73258866
chr2 40509844 40509855 STAT1 JASPAR yes 22040401
chr2 40509844 40509855 STAT3 JASPAR yes 22040402
chr2 40509844 40509855 STAT1 JASPAR yes 73258867
chr2 40509844 40509855 STAT3 JASPAR yes 73258868
chr2 40509861 40509876 MAFK JASPAR yes 22040403
chr2 40509861 40509876 MAFK JASPAR yes 73258869
chr2 40509863 40509876 JUN JASPAR yes 22040404
chr2 40509863 40509876 JUN JASPAR yes 73258870
chr2 40509865 40509876 NRL JASPAR yes 22040405
chr2 40509865 40509876 NRL JASPAR yes 73258871
chr2 40509869 40509884 PRDM1 JASPAR yes 22040406
chr2 40509869 40509884 PRDM1 JASPAR yes 73258872
chr2 40509870 40509874 YY1 TRANSFAC yes 22040407
chr2 40509870 40509874 YY1 TRANSFAC yes 73258873
chr2 40509875 40509894 REST JASPAR yes 22040408
chr2 40509875 40509894 REST JASPAR yes 73258874
chr2 40509890 40509905 RFX5 JASPAR yes 22040409
chr2 40509890 40509905 RFX5 JASPAR yes 73258875
chr2 40509898 40509901 MYB TRANSFAC yes 22040410
chr2 40509898 40509901 MYB TRANSFAC yes 73258876
chr2 40509906 40509916 MSC JASPAR yes 22040411
chr2 40509906 40509916 MSC JASPAR yes 73258877
chr2 40509910 40509922 MEF2A JASPAR yes 22040412
chr2 40509910 40509922 MEF2B JASPAR yes 22040413
chr2 40509910 40509922 MEF2D JASPAR yes 22040414
chr2 40509910 40509922 MEF2A JASPAR yes 73258878
chr2 40509910 40509922 MEF2B JASPAR yes 73258879
chr2 40509910 40509922 MEF2D JASPAR yes 73258880
chr2 40509911 40509921 MEF2A JASPAR yes 22040415
chr2 40509911 40509921 MEF2A JASPAR yes 73258881
chr2 40509921 40509926 GATA2 JASPAR yes 22040416
chr2 40509921 40509926 GATA2 JASPAR yes 73258882
chr2 40509948 40509963 HNF4A JASPAR yes 22040417
chr2 40509948 40509963 HNF4A JASPAR yes 73258883
chr2 40509949 40509963 RXRB JASPAR yes 22040418
chr2 40509949 40509963 RXRG JASPAR yes 22040419
chr2 40509949 40509963 RXRB JASPAR yes 73258884
chr2 40509949 40509963 RXRG JASPAR yes 73258885
chr2 40509949 40509964 HNF4G JASPAR yes 22040420
chr2 40509949 40509964 NR2C2 JASPAR yes 22040421
chr2 40509949 40509964 HNF4G JASPAR yes 73258886
chr2 40509949 40509964 NR2C2 JASPAR yes 73258887
chr2 40509964 40509968 TEAD2 TRANSFAC yes 22040422
chr2 40509964 40509968 TEAD2 TRANSFAC yes 73258888
chr2 40509964 40509969 TBP TRANSFAC yes 22040423
chr2 40509964 40509969 TBP TRANSFAC yes 73258889
chr2 40509966 40509979 DUXA JASPAR yes 22040424
chr2 40509966 40509979 DUXA JASPAR yes 73258890
chr2 40509967 40509978 DUX4 JASPAR yes 22040425
chr2 40509967 40509978 DUX4 JASPAR yes 73258891
chr2 40509971 40509975 H1TF2 TRANSFAC yes 22040426
chr2 40509971 40509975 NFE TRANSFAC yes 22040427
chr2 40509971 40509975 SRF TRANSFAC yes 22040428
chr2 40509971 40509975 H1TF2 TRANSFAC yes 73258892
chr2 40509971 40509975 NFE TRANSFAC yes 73258893
chr2 40509971 40509975 SRF TRANSFAC yes 73258894
SNP sites on vista31164[chr2:40509736-40509978]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 40509773 rs376199552 C T
BARHL2
5673325
chr2 40509840 rs116296954 A G
ELF3 FEV FLI1
5673326
chr2 40509865 rs6544315 T G
JUN MAFK NRL
5673327
chr2 40509970 rs6544316 A G
DUX4 DUXA
5673328
Genes possibly regulated by vista31164[chr2:40509736-40509978]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 40488147 40490117 + AC007377.1 ENSG00000268898.1 40488147 0.0 0.0 2302 78411
Expression level of Genes
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miRNAs possibly regulated by vista31164[chr2:40509736-40509978]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results