EnhancerDB
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  3. vista31916[chr2:68780015-68780176]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31916[chr2:68780015-68780176]
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Tissue distribution of vista31916
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Transcription factor that possibly regulate vista31916[chr2:68780015-68780176]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 68780032 68780046 GATA2 JASPAR yes 22076165
chr2 68780034 68780042 GATA3 JASPAR yes 22076166
chr2 68780047 68780051 YY1 TRANSFAC yes 22076167
chr2 68780047 68780062 FOXP1 JASPAR yes 22076168
chr2 68780062 68780075 POU3F3 JASPAR yes 22076169
chr2 68780063 68780075 POU3F1 JASPAR yes 22076170
chr2 68780066 68780076 HOXD13 JASPAR yes 22076171
chr2 68780066 68780077 HOXA10 JASPAR yes 22076172
chr2 68780067 68780077 ALX3 JASPAR yes 22076173
chr2 68780067 68780077 GSX1 JASPAR yes 22076174
chr2 68780067 68780077 GSX2 JASPAR yes 22076175
chr2 68780067 68780077 HOXB2 JASPAR yes 22076176
chr2 68780067 68780077 HOXB3 JASPAR yes 22076177
chr2 68780067 68780077 MEOX2 JASPAR yes 22076178
chr2 68780067 68780077 MIXL1 JASPAR yes 22076179
chr2 68780067 68780077 MNX1 JASPAR yes 22076180
chr2 68780068 68780076 LMX1A JASPAR yes 22076181
chr2 68780068 68780076 LMX1B JASPAR yes 22076182
chr2 68780068 68780076 NKX6-1 JASPAR yes 22076183
chr2 68780068 68780076 NKX6-2 JASPAR yes 22076184
chr2 68780068 68780076 PDX1 JASPAR yes 22076185
chr2 68780068 68780076 VAX1 JASPAR yes 22076186
chr2 68780068 68780076 VAX2 JASPAR yes 22076187
chr2 68780068 68780076 VSX1 JASPAR yes 22076188
chr2 68780106 68780118 PBX1 JASPAR yes 22076189
chr2 68780106 68780124 MAFF JASPAR yes 22076190
chr2 68780107 68780121 ONECUT1 JASPAR yes 22076191
chr2 68780107 68780121 ONECUT2 JASPAR yes 22076192
chr2 68780107 68780121 ONECUT3 JASPAR yes 22076193
chr2 68780108 68780118 CUX1 JASPAR yes 22076194
chr2 68780108 68780118 CUX2 JASPAR yes 22076195
chr2 68780108 68780118 PAX3 JASPAR yes 22076196
chr2 68780108 68780118 PAX7 JASPAR yes 22076197
chr2 68780131 68780143 MEF2A JASPAR yes 22076198
chr2 68780132 68780142 MEF2A JASPAR yes 22076199
chr2 68780137 68780151 SPI1 JASPAR yes 22076200
chr2 68780137 68780151 SPIC JASPAR yes 22076201
SNP sites on vista31916[chr2:68780015-68780176]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 68780071 rs183279187 A G
ALX3 GSX1 GSX2 HOXA10 HOXB2 HOXB3 HOXD13 LMX1A LMX1B MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 PDX1 POU3F1 POU3F3 VAX1 VAX2 VSX1
5822624
Genes possibly regulated by vista31916[chr2:68780015-68780176]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 68686551 68694390 - FBXO48 ENSG00000204923.3 68694390 0.63 0.99 2416 14375
chr2 68694693 68858004 + APLF ENSG00000169621.5 68694693 0.69 0.99 2417 14678
chr2 68870721 68882708 + PROKR1 ENSG00000169618.4 68870721 0.91 0.91 2418 9455
Expression level of Genes
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miRNAs possibly regulated by vista31916[chr2:68780015-68780176]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results