EnhancerDB
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  3. vista31952[chr2:69533320-69533461]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista31952[chr2:69533320-69533461]
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Tissue distribution of vista31952
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Transcription factor that possibly regulate vista31952[chr2:69533320-69533461]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 69533311 69533321 GABPA JASPAR yes 22077817
chr2 69533311 69533321 GABPA JASPAR yes 74838146
chr2 69533318 69533327 NFIX JASPAR yes 22077818
chr2 69533318 69533327 NFIX JASPAR yes 74838147
chr2 69533318 69533328 NFIA JASPAR yes 22077819
chr2 69533318 69533328 NFIA JASPAR yes 74838148
chr2 69533320 69533326 NFIC JASPAR yes 22077820
chr2 69533320 69533326 NFIC JASPAR yes 74838149
chr2 69533322 69533343 IRF1 JASPAR yes 22077821
chr2 69533322 69533343 IRF1 JASPAR yes 74838150
chr2 69533326 69533341 PRDM1 JASPAR yes 22077822
chr2 69533326 69533341 PRDM1 JASPAR yes 74838151
chr2 69533330 69533335 ETS2 TRANSFAC yes 22077823
chr2 69533330 69533335 ETS2 TRANSFAC yes 74838152
chr2 69533334 69533355 ZNF263 JASPAR yes 22077824
chr2 69533334 69533355 ZNF263 JASPAR yes 74838153
chr2 69533344 69533354 GABPA JASPAR yes 22077825
chr2 69533344 69533354 GABPA JASPAR yes 74838154
chr2 69533344 69533365 ZNF263 JASPAR yes 22077826
chr2 69533344 69533365 ZNF263 JASPAR yes 74838155
chr2 69533345 69533350 ETS2 TRANSFAC yes 22077827
chr2 69533345 69533350 ETS2 TRANSFAC yes 74838156
chr2 69533353 69533364 E2F1 JASPAR yes 22077828
chr2 69533353 69533364 E2F1 JASPAR yes 74838157
chr2 69533354 69533359 SP1 TRANSFAC yes 22077829
chr2 69533354 69533359 SP1 TRANSFAC yes 74838158
chr2 69533354 69533365 E2F4 JASPAR yes 22077830
chr2 69533354 69533365 E2F6 JASPAR yes 22077831
chr2 69533354 69533365 E2F4 JASPAR yes 74838159
chr2 69533354 69533365 E2F6 JASPAR yes 74838160
chr2 69533355 69533360 SP1 TRANSFAC yes 22077832
chr2 69533355 69533360 SP1 TRANSFAC yes 74838161
chr2 69533362 69533374 GLI2 JASPAR yes 22077833
chr2 69533362 69533374 GLI2 JASPAR yes 74838162
chr2 69533369 69533373 YY1 TRANSFAC yes 22077834
chr2 69533369 69533373 YY1 TRANSFAC yes 74838163
chr2 69533382 69533397 FOXA1 JASPAR yes 22077835
chr2 69533382 69533397 FOXA1 JASPAR yes 74838164
chr2 69533385 69533396 FOXB1 JASPAR yes 22077836
chr2 69533385 69533396 FOXC1 JASPAR yes 22077837
chr2 69533385 69533396 FOXB1 JASPAR yes 74838165
chr2 69533385 69533396 FOXC1 JASPAR yes 74838166
chr2 69533386 69533390 YY1 TRANSFAC yes 22077838
chr2 69533386 69533390 YY1 TRANSFAC yes 74838167
chr2 69533393 69533399 GATA3 JASPAR yes 22077839
chr2 69533393 69533399 GATA3 JASPAR yes 74838168
chr2 69533424 69533435 CDX2 JASPAR yes 22077840
chr2 69533424 69533435 CDX2 JASPAR yes 74838169
chr2 69533428 69533432 TEAD2 TRANSFAC yes 22077841
chr2 69533428 69533432 TEAD2 TRANSFAC yes 74838170
chr2 69533428 69533433 TBP TRANSFAC yes 22077842
chr2 69533428 69533433 TBP TRANSFAC yes 74838171
SNP sites on vista31952[chr2:69533320-69533461]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 69533321 rs192368711 T C
GABPA NFIA NFIC NFIX
5828343
chr2 69533324 rs113205177 CA C
IRF1 NFIA NFIC NFIX
5828344
chr2 69533324 rs372749716 C CA
IRF1 NFIA NFIC NFIX
5828345
chr2 69533324 rs546846813 C CA
IRF1 NFIA NFIC NFIX
5828346
chr2 69533354 rs558746919 G A
E2F1 E2F4 E2F6 GABPA SP1 ZNF263
5828347
Genes possibly regulated by vista31952[chr2:69533320-69533461]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 69546905 69614382 - GFPT1 ENSG00000198380.8 69614382 0.78 1.0 2424 19079
Expression level of Genes
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miRNAs possibly regulated by vista31952[chr2:69533320-69533461]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results