EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr2	75043704	75043911	FOXA1	UCSC Txn Factor	no	Conserved	108433000
chr2	75043714	75043981	GATA2	UCSC Txn Factor	no	Conserved	108433001
chr2	75043713	75043733	TP63	JASPAR	yes		22084281
chr2	75043713	75043733	TP63	JASPAR	yes		75106729
chr2	75043785	75043799	FOXF2	JASPAR	yes		22084282
chr2	75043785	75043799	FOXF2	JASPAR	yes		75106731
chr2	75043786	75043801	FOXA1	JASPAR	yes		22084283
chr2	75043786	75043801	FOXA1	JASPAR	yes		75106732
chr2	75043787	75043798	FOXB1	JASPAR	yes		22084284
chr2	75043787	75043798	FOXC1	JASPAR	yes		22084285
chr2	75043787	75043798	FOXB1	JASPAR	yes		75106733
chr2	75043787	75043798	FOXC1	JASPAR	yes		75106734
chr2	75043788	75043803	HNF1A	JASPAR	yes		22084286
chr2	75043788	75043803	HNF1A	JASPAR	yes		75106735
chr2	75043789	75043801	HNF1B	JASPAR	yes		22084287
chr2	75043789	75043801	HNF1B	JASPAR	yes		75106736
chr2	75043789	75043802	HNF1B	JASPAR	yes		22084288
chr2	75043789	75043802	HNF1B	JASPAR	yes		75106737
chr2	75043798	75043801	MYB	TRANSFAC	yes		22084289
chr2	75043798	75043801	MYB	TRANSFAC	yes		75106738

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr2	75043746	rs78473814	T	A	FOXA1 GATA2	5854064
chr2	75043779	rs112918442	C	G,T	FOXA1 GATA2	5854065
chr2	75043793	rs560643032	A	T	FOXA1 FOXB1 FOXC1 FOXF2 GATA2 HNF1A HNF1B	5854066
chr2	75043804	rs116592270	C	T	FOXA1 GATA2	5854067

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr2	75061108	75120486	+	HK2	ENSG00000159399.5	75061108	0.73	1.0	2503	82716

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results