EnhancerDB
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  3. vista323[chr1:10359215-10359483]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista323[chr1:10359215-10359483]
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Tissue distribution of vista323
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Transcription factor that possibly regulate vista323[chr1:10359215-10359483]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10359227 10359231 NFE TRANSFAC yes 26711704
chr1 10359227 10359231 NFE TRANSFAC yes 118228348
chr1 10359228 10359233 GATA2 JASPAR yes 26711705
chr1 10359228 10359233 GATA2 JASPAR yes 118228349
chr1 10359234 10359237 MYB TRANSFAC yes 26711706
chr1 10359234 10359237 MYB TRANSFAC yes 118228350
chr1 10359249 10359264 AR JASPAR yes 26711707
chr1 10359249 10359264 AR JASPAR yes 118228351
chr1 10359270 10359282 YY1 JASPAR yes 26711708
chr1 10359270 10359282 YY1 JASPAR yes 118228352
chr1 10359273 10359279 YY1 JASPAR yes 26711709
chr1 10359273 10359279 YY1 JASPAR yes 118228353
chr1 10359280 10359295 FOXP1 JASPAR yes 26711710
chr1 10359280 10359295 FOXP1 JASPAR yes 118228354
chr1 10359281 10359302 IRF1 JASPAR yes 26711711
chr1 10359281 10359302 IRF1 JASPAR yes 118228355
chr1 10359283 10359298 IRF9 JASPAR yes 26711712
chr1 10359283 10359298 IRF9 JASPAR yes 118228356
chr1 10359284 10359298 IRF7 JASPAR yes 26711713
chr1 10359284 10359298 IRF7 JASPAR yes 118228357
chr1 10359285 10359299 SPIC JASPAR yes 26711714
chr1 10359285 10359299 SPIC JASPAR yes 118228358
chr1 10359285 10359300 PRDM1 JASPAR yes 26711715
chr1 10359285 10359300 STAT2 JASPAR yes 26711716
chr1 10359285 10359300 PRDM1 JASPAR yes 118228359
chr1 10359285 10359300 STAT2 JASPAR yes 118228360
chr1 10359287 10359308 IRF1 JASPAR yes 26711717
chr1 10359287 10359308 IRF1 JASPAR yes 118228361
chr1 10359289 10359304 IRF9 JASPAR yes 26711718
chr1 10359289 10359304 IRF9 JASPAR yes 118228362
chr1 10359290 10359304 IRF7 JASPAR yes 26711719
chr1 10359290 10359304 IRF7 JASPAR yes 118228363
chr1 10359291 10359306 PRDM1 JASPAR yes 26711720
chr1 10359291 10359306 PRDM1 JASPAR yes 118228364
chr1 10359309 10359321 FOXI1 JASPAR yes 26711721
chr1 10359309 10359321 FOXI1 JASPAR yes 118228365
chr1 10359312 10359316 YY1 TRANSFAC yes 26711722
chr1 10359312 10359316 YY1 TRANSFAC yes 118228366
chr1 10359317 10359331 EBF1 JASPAR yes 26711723
chr1 10359317 10359331 EBF1 JASPAR yes 118228367
chr1 10359317 10359332 STAT1 JASPAR yes 26711724
chr1 10359317 10359332 STAT1 JASPAR yes 118228368
chr1 10359361 10359376 FOXA1 JASPAR yes 26711725
chr1 10359361 10359376 FOXA1 JASPAR yes 118228369
chr1 10359365 10359376 FOXA1 JASPAR yes 26711726
chr1 10359365 10359376 FOXA1 JASPAR yes 118228370
chr1 10359377 10359382 GATA1 TRANSFAC yes 26711727
chr1 10359377 10359382 GATA1 TRANSFAC yes 118228371
chr1 10359396 10359401 H4TF1 TRANSFAC yes 26711728
chr1 10359396 10359401 H4TF1 TRANSFAC yes 118228372
chr1 10359404 10359416 NHLH1 JASPAR yes 26711729
chr1 10359404 10359416 NHLH1 JASPAR yes 118228373
chr1 10359417 10359430 ELF1 JASPAR yes 26711730
chr1 10359417 10359430 ELF1 JASPAR yes 118228374
chr1 10359421 10359426 ETS2 TRANSFAC yes 26711731
chr1 10359421 10359426 ETS2 TRANSFAC yes 118228375
chr1 10359421 10359429 FEV JASPAR yes 26711732
chr1 10359421 10359429 FEV JASPAR yes 118228376
chr1 10359422 10359429 SPI1 JASPAR yes 26711733
chr1 10359422 10359429 SPI1 JASPAR yes 118228377
chr1 10359433 10359440 SPIB JASPAR yes 26711734
chr1 10359433 10359440 SPIB JASPAR yes 118228378
chr1 10359444 10359459 AR JASPAR yes 26711735
chr1 10359444 10359459 AR JASPAR yes 118228379
chr1 10359447 10359451 NFE TRANSFAC yes 26711736
chr1 10359447 10359451 NFE TRANSFAC yes 118228380
chr1 10359448 10359469 IRF1 JASPAR yes 26711737
chr1 10359448 10359469 IRF1 JASPAR yes 118228381
chr1 10359450 10359465 STAT2 JASPAR yes 26711738
chr1 10359450 10359465 STAT2 JASPAR yes 118228382
chr1 10359452 10359466 IRF8 JASPAR yes 26711739
chr1 10359452 10359466 IRF8 JASPAR yes 118228383
chr1 10359454 10359475 IRF1 JASPAR yes 26711740
chr1 10359454 10359475 IRF1 JASPAR yes 118228384
chr1 10359456 10359471 PRDM1 JASPAR yes 26711741
chr1 10359456 10359471 STAT2 JASPAR yes 26711742
chr1 10359456 10359471 PRDM1 JASPAR yes 118228385
chr1 10359456 10359471 STAT2 JASPAR yes 118228386
chr1 10359457 10359471 STAT1 JASPAR yes 26711743
chr1 10359457 10359471 STAT1 JASPAR yes 118228387
chr1 10359458 10359470 IRF1 JASPAR yes 26711744
chr1 10359458 10359470 IRF1 JASPAR yes 118228388
chr1 10359463 10359467 YY1 TRANSFAC yes 26711745
chr1 10359463 10359467 YY1 TRANSFAC yes 118228389
chr1 10359479 10359485 PEA3 TRANSFAC yes 26711746
chr1 10359479 10359485 PEA3 TRANSFAC yes 118228390
SNP sites on vista323[chr1:10359215-10359483]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10359252 rs185961005 T C
AR
71510
chr1 10359299 rs397798501 G GA
IRF1 IRF7 IRF9 PRDM1 SPIC STAT2
71511
chr1 10359299 rs397823907 G GA
IRF1 IRF7 IRF9 PRDM1 SPIC STAT2
71512
chr1 10359299 rs5772407 G GA
IRF1 IRF7 IRF9 PRDM1 SPIC STAT2
71513
chr1 10359310 rs553577146 A T
FOXI1
71514
chr1 10359322 rs143455654 T G
EBF1 STAT1
71515
Genes possibly regulated by vista323[chr1:10359215-10359483]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10270863 10441661 + KIF1B ENSG00000054523.12 10270863 0.73 1.0 134 11648
chr1 10458649 10480201 + PGD ENSG00000142657.16 10458649 0.73 0.99 135 834
Expression level of Genes
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miRNAs possibly regulated by vista323[chr1:10359215-10359483]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results