EnhancerDB
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  3. vista3237[chr1:149816287-149817606]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3237[chr1:149816287-149817606]
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Tissue distribution of vista3237
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Transcription factor that possibly regulate vista3237[chr1:149816287-149817606]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149814942 149818114 POLR2A UCSC Txn Factor no Conserved 107827323
chr1 149816293 149816297 NFE TRANSFAC yes 118365466
chr1 149816297 149816303 NFE2 TRANSFAC yes 118365467
chr1 149816305 149816315 ALX3 JASPAR yes 118365468
chr1 149816305 149816315 ESX1 JASPAR yes 118365469
chr1 149816305 149816315 GSX1 JASPAR yes 118365470
chr1 149816305 149816315 GSX2 JASPAR yes 118365471
chr1 149816305 149816315 LBX2 JASPAR yes 118365472
chr1 149816305 149816315 MIXL1 JASPAR yes 118365473
chr1 149816305 149816315 RAX JASPAR yes 118365474
chr1 149816306 149816310 H1TF2 TRANSFAC yes 118365475
chr1 149816306 149816310 NFE TRANSFAC yes 118365476
chr1 149816306 149816310 SRF TRANSFAC yes 118365477
chr1 149816306 149816314 BARX1 JASPAR yes 118365478
chr1 149816306 149816314 BSX JASPAR yes 118365479
chr1 149816306 149816314 DLX6 JASPAR yes 118365480
chr1 149816306 149816314 ISX JASPAR yes 118365481
chr1 149816306 149816314 LBX1 JASPAR yes 118365482
chr1 149816306 149816314 LHX9 JASPAR yes 118365483
chr1 149816306 149816314 MSX1 JASPAR yes 118365484
chr1 149816306 149816314 MSX2 JASPAR yes 118365485
chr1 149816306 149816314 NKX6-2 JASPAR yes 118365486
chr1 149816306 149816314 PRRX1 JASPAR yes 118365487
chr1 149816306 149816314 RAX2 JASPAR yes 118365488
chr1 149816306 149816314 SHOX JASPAR yes 118365489
chr1 149816306 149816314 UNCX JASPAR yes 118365490
chr1 149816306 149816316 HOXA13 JASPAR yes 118365491
chr1 149816306 149816316 HOXB13 JASPAR yes 118365492
chr1 149816306 149816316 HOXD13 JASPAR yes 118365493
chr1 149816307 149816322 FOXP1 JASPAR yes 118365494
chr1 149816307 149816322 MEF2C JASPAR yes 118365495
chr1 149816336 149816354 MAFF JASPAR yes 118365496
chr1 149816338 149816353 MAFK JASPAR yes 118365497
chr1 149816338 149816359 MAFG JASPAR yes 118365498
chr1 149816356 149816360 YY1 TRANSFAC yes 118365499
chr1 149816357 149816367 HOXA13 JASPAR yes 118365500
chr1 149816357 149816367 HOXB13 JASPAR yes 118365501
chr1 149816357 149816367 HOXD13 JASPAR yes 118365502
chr1 149816357 149816368 HOXA10 JASPAR yes 118365503
chr1 149816358 149816367 CDX1 JASPAR yes 118365504
chr1 149816358 149816369 CDX2 JASPAR yes 118365505
chr1 149816362 149816372 NFIA JASPAR yes 118365506
chr1 149816364 149816370 NFIC JASPAR yes 118365507
chr1 149816367 149816382 FOXP1 JASPAR yes 118365508
chr1 149816367 149816388 IRF1 JASPAR yes 118365509
chr1 149816368 149816383 FOXP1 JASPAR yes 118365510
chr1 149816368 149816389 IRF1 JASPAR yes 118365511
chr1 149816369 149816384 FOXP1 JASPAR yes 118365512
chr1 149816369 149816390 IRF1 JASPAR yes 118365513
chr1 149816370 149816385 FOXP1 JASPAR yes 118365514
chr1 149816371 149816386 FOXP1 JASPAR yes 118365515
chr1 149816372 149816387 FOXP1 JASPAR yes 118365516
chr1 149816372 149816393 IRF1 JASPAR yes 118365517
chr1 149816373 149816388 FOXP1 JASPAR yes 118365518
chr1 149816391 149816397 TCF1 TRANSFAC yes 118365519
chr1 149816391 149816398 TCF4 TRANSFAC yes 118365520
chr1 149816403 149816409 MZF1 JASPAR yes 118365521
chr1 149816414 149816418 YY1 TRANSFAC yes 118365522
chr1 149816430 149816440 TEAD1 JASPAR yes 118365523
chr1 149816431 149816449 SRF JASPAR yes 118365524
chr1 149816433 149816449 SRF JASPAR yes 118365525
chr1 149816433 149816451 SRF JASPAR yes 118365526
chr1 149816434 149816446 SRF JASPAR yes 118365527
chr1 149816436 149816445 SRF TRANSFAC yes 118365528
chr1 149816436 149816448 SRF JASPAR yes 118365529
chr1 149816454 149816468 GATA2 JASPAR yes 118365530
chr1 149816456 149816464 GATA3 JASPAR yes 118365531
chr1 149816456 149816464 GATA5 JASPAR yes 118365532
chr1 149816486 149816507 ZNF263 JASPAR yes 118365533
chr1 149816497 149816507 MZF1 JASPAR yes 118365534
chr1 149816499 149816512 SMAD2 JASPAR yes 118365535
chr1 149816531 149816547 SRF JASPAR yes 118365536
chr1 149816537 149816541 TEAD2 TRANSFAC yes 118365537
chr1 149816542 149816550 FOXC1 JASPAR yes 118365538
chr1 149816544 149816551 NKX3-1 JASPAR yes 118365539
chr1 149816544 149816555 FOXB1 JASPAR yes 118365540
chr1 149816556 149816561 ETS2 TRANSFAC yes 118365541
chr1 149816563 149816566 MYB TRANSFAC yes 118365542
chr1 149816569 149816578 SNAI2 JASPAR yes 118365543
chr1 149816570 149816575 USF2 TRANSFAC yes 118365544
chr1 149816582 149816596 FOXF2 JASPAR yes 118365545
chr1 149816591 149816604 DUXA JASPAR yes 118365546
chr1 149816591 149816605 RORA JASPAR yes 118365547
chr1 149816592 149816595 MYB TRANSFAC yes 118365548
chr1 149816592 149816603 DUX4 JASPAR yes 118365549
chr1 149816592 149816603 PHOX2A JASPAR yes 118365550
chr1 149816592 149816603 PROP1 JASPAR yes 118365551
chr1 149816594 149816604 POU6F2 JASPAR yes 118365552
chr1 149816595 149816605 ALX3 JASPAR yes 118365553
chr1 149816595 149816605 GSX1 JASPAR yes 118365554
chr1 149816595 149816605 MEOX1 JASPAR yes 118365555
chr1 149816596 149816604 LBX1 JASPAR yes 118365556
chr1 149816596 149816604 PDX1 JASPAR yes 118365557
chr1 149816596 149816604 VAX1 JASPAR yes 118365558
chr1 149816596 149816604 VAX2 JASPAR yes 118365559
chr1 149816596 149816604 VSX1 JASPAR yes 118365560
chr1 149816596 149816604 VSX2 JASPAR yes 118365561
chr1 149816596 149816606 MEF2A JASPAR yes 118365562
chr1 149816610 149816615 ETS2 TRANSFAC yes 118365563
chr1 149816621 149816625 ESR1 TRANSFAC yes 118365564
chr1 149816627 149816631 YY1 TRANSFAC yes 118365565
chr1 149816632 149816636 H4TF2 TRANSFAC yes 118365566
chr1 149816637 149816642 TFAP2A TRANSFAC yes 118365567
chr1 149816637 149816643 MZF1 JASPAR yes 118365568
chr1 149816657 149816671 ONECUT3 JASPAR yes 118365569
chr1 149816661 149816672 CDX2 JASPAR yes 118365570
chr1 149816662 149816673 FOXH1 JASPAR yes 118365571
chr1 149816662 149816673 HOXA10 JASPAR yes 118365572
chr1 149816663 149816672 CDX1 JASPAR yes 118365573
chr1 149816663 149816673 HOXA13 JASPAR yes 118365574
chr1 149816663 149816673 HOXB13 JASPAR yes 118365575
chr1 149816663 149816673 HOXD13 JASPAR yes 118365576
chr1 149816664 149816675 FOXP2 JASPAR yes 118365577
chr1 149816664 149816676 FOXI1 JASPAR yes 118365578
chr1 149816675 149816678 MYB TRANSFAC yes 118365579
chr1 149816691 149816704 DUXA JASPAR yes 118365580
chr1 149816692 149816703 DUX4 JASPAR yes 118365581
chr1 149816692 149816703 PHOX2A JASPAR yes 118365582
chr1 149816692 149816703 PROP1 JASPAR yes 118365583
chr1 149816693 149816704 FOXB1 JASPAR yes 118365584
chr1 149816695 149816705 MEOX2 JASPAR yes 118365585
chr1 149816695 149816705 MNX1 JASPAR yes 118365586
chr1 149816697 149816708 PHOX2A JASPAR yes 118365587
chr1 149816697 149816708 PROP1 JASPAR yes 118365588
chr1 149816708 149816716 MEIS2 JASPAR yes 118365589
chr1 149816708 149816716 MEIS3 JASPAR yes 118365590
chr1 149816709 149816713 NFE TRANSFAC yes 118365591
chr1 149816709 149816716 MEIS1 JASPAR yes 118365592
chr1 149816717 149816738 IRF1 JASPAR yes 118365593
chr1 149816719 149816734 PRDM1 JASPAR yes 118365594
chr1 149816719 149816734 STAT2 JASPAR yes 118365595
chr1 149816725 149816730 ETS2 TRANSFAC yes 118365596
chr1 149816753 149816759 TCF4 TRANSFAC yes 118365597
chr1 149816779 149816783 YY1 TRANSFAC yes 118365598
chr1 149816784 149816795 FOXH1 JASPAR yes 118365599
chr1 149816788 149816792 YY1 TRANSFAC yes 118365600
chr1 149816802 149816816 E2F7 JASPAR yes 118365601
chr1 149816817 149816838 IRF1 JASPAR yes 118365602
chr1 149816821 149816835 STAT1 JASPAR yes 118365603
chr1 149816821 149816836 STAT2 JASPAR yes 118365604
chr1 149816845 149816850 GATA2 JASPAR yes 118365605
chr1 149816854 149816865 STAT3 JASPAR yes 118365606
chr1 149816866 149816880 FOXF2 JASPAR yes 118365607
chr1 149816866 149816881 FOXP1 JASPAR yes 118365608
chr1 149816869 149816880 FOXP2 JASPAR yes 118365609
chr1 149816871 149816878 FOXD2 JASPAR yes 118365610
chr1 149816871 149816878 FOXI1 JASPAR yes 118365611
chr1 149816871 149816878 FOXL1 JASPAR yes 118365612
chr1 149816871 149816878 FOXO4 JASPAR yes 118365613
chr1 149816871 149816878 FOXO6 JASPAR yes 118365614
chr1 149816871 149816878 FOXP3 JASPAR yes 118365615
chr1 149816871 149816879 FOXD1 JASPAR yes 118365616
chr1 149816871 149816879 FOXO3 JASPAR yes 118365617
chr1 149816894 149816898 YY1 TRANSFAC yes 118365618
chr1 149816896 149816906 HOXB13 JASPAR yes 118365619
chr1 149816896 149816906 HOXD13 JASPAR yes 118365620
chr1 149816896 149816907 HOXA10 JASPAR yes 118365621
chr1 149816897 149816907 ALX3 JASPAR yes 118365622
chr1 149816897 149816907 EMX1 JASPAR yes 118365623
chr1 149816897 149816907 EMX2 JASPAR yes 118365624
chr1 149816897 149816907 ESX1 JASPAR yes 118365625
chr1 149816897 149816907 GBX2 JASPAR yes 118365626
chr1 149816897 149816907 GSX1 JASPAR yes 118365627
chr1 149816897 149816907 GSX2 JASPAR yes 118365628
chr1 149816897 149816907 HESX1 JASPAR yes 118365629
chr1 149816897 149816907 HOXB2 JASPAR yes 118365630
chr1 149816897 149816907 HOXB3 JASPAR yes 118365631
chr1 149816897 149816907 LBX2 JASPAR yes 118365632
chr1 149816897 149816907 LHX2 JASPAR yes 118365633
chr1 149816897 149816907 LHX6 JASPAR yes 118365634
chr1 149816897 149816907 MEOX1 JASPAR yes 118365635
chr1 149816897 149816907 MEOX2 JASPAR yes 118365636
chr1 149816897 149816907 MIXL1 JASPAR yes 118365637
chr1 149816897 149816907 MNX1 JASPAR yes 118365638
chr1 149816897 149816907 NOTO JASPAR yes 118365639
chr1 149816897 149816907 RAX JASPAR yes 118365640
chr1 149816898 149816906 BSX JASPAR yes 118365641
chr1 149816898 149816906 DLX6 JASPAR yes 118365642
chr1 149816898 149816906 EN1 JASPAR yes 118365643
chr1 149816898 149816906 ISX JASPAR yes 118365644
chr1 149816898 149816906 LBX1 JASPAR yes 118365645
chr1 149816898 149816906 LHX9 JASPAR yes 118365646
chr1 149816898 149816906 LMX1A JASPAR yes 118365647
chr1 149816898 149816906 LMX1B JASPAR yes 118365648
chr1 149816898 149816906 NKX6-1 JASPAR yes 118365649
chr1 149816898 149816906 NKX6-2 JASPAR yes 118365650
chr1 149816898 149816906 PAX4 JASPAR yes 118365651
chr1 149816898 149816906 PDX1 JASPAR yes 118365652
chr1 149816898 149816906 PRRX1 JASPAR yes 118365653
chr1 149816898 149816906 RAX2 JASPAR yes 118365654
chr1 149816898 149816906 SHOX JASPAR yes 118365655
chr1 149816898 149816906 UNCX JASPAR yes 118365656
chr1 149816898 149816906 VAX1 JASPAR yes 118365657
chr1 149816898 149816906 VAX2 JASPAR yes 118365658
chr1 149816898 149816906 VSX1 JASPAR yes 118365659
chr1 149816898 149816906 VSX2 JASPAR yes 118365660
chr1 149816898 149816908 POU6F2 JASPAR yes 118365661
chr1 149816898 149816912 POU1F1 JASPAR yes 118365662
chr1 149816899 149816911 POU3F2 JASPAR yes 118365663
chr1 149816899 149816912 POU3F3 JASPAR yes 118365664
chr1 149816910 149816917 NKX3-1 JASPAR yes 118365665
chr1 149816923 149816930 JUN TRANSFAC yes 118365666
chr1 149816929 149816941 POU3F1 JASPAR yes 118365667
chr1 149816929 149816942 POU2F2 JASPAR yes 118365668
chr1 149816932 149816946 POU4F1 JASPAR yes 118365669
chr1 149816946 149816951 SP1 TRANSFAC yes 118365670
chr1 149816949 149816959 NEUROD2 JASPAR yes 118365671
chr1 149816949 149816959 OLIG1 JASPAR yes 118365672
chr1 149816949 149816959 OLIG2 JASPAR yes 118365673
chr1 149816949 149816959 OLIG3 JASPAR yes 118365674
chr1 149816965 149816984 PAX5 JASPAR yes 118365675
chr1 149816969 149816976 NKX3-1 JASPAR yes 118365676
chr1 149817000 149817008 MEIS2 JASPAR yes 118365677
chr1 149817000 149817008 MEIS3 JASPAR yes 118365678
chr1 149817001 149817013 PKNOX1 JASPAR yes 118365679
chr1 149817001 149817013 PKNOX2 JASPAR yes 118365680
chr1 149817001 149817013 TGIF1 JASPAR yes 118365681
chr1 149817001 149817013 TGIF2 JASPAR yes 118365682
chr1 149817006 149817019 ATF4 JASPAR yes 118365683
chr1 149817048 149817054 GATA3 JASPAR yes 118365684
chr1 149817059 149817064 GATA2 JASPAR yes 118365685
chr1 149817078 149817089 STAT1 JASPAR yes 118365686
chr1 149817078 149817089 STAT3 JASPAR yes 118365687
chr1 149817096 149817104 FOXC1 JASPAR yes 118365688
chr1 149817098 149817105 NKX3-1 JASPAR yes 118365689
chr1 149817098 149817112 TCF7L2 JASPAR yes 118365690
chr1 149817098 149817113 HNF4G JASPAR yes 118365691
chr1 149817099 149817114 HNF4A JASPAR yes 118365692
chr1 149817103 149817109 SOX10 JASPAR yes 118365693
chr1 149817105 149817120 TFAP2A JASPAR yes 118365694
chr1 149817108 149817120 TFAP2A JASPAR yes 118365695
chr1 149817108 149817120 TFAP2B JASPAR yes 118365696
chr1 149817108 149817120 TFAP2C JASPAR yes 118365697
chr1 149817108 149817123 TFAP2A JASPAR yes 118365698
chr1 149817117 149817132 TP53 JASPAR yes 118365699
chr1 149817135 149817148 EOMES JASPAR yes 118365700
chr1 149817136 149817146 TBR1 JASPAR yes 118365701
chr1 149817180 149817195 PRDM1 JASPAR yes 118365702
chr1 149817209 149817224 TFAP2A JASPAR yes 118365703
chr1 149817223 149817231 RHOXF1 JASPAR yes 118365704
chr1 149817226 149817240 RORA JASPAR yes 118365705
chr1 149817237 149817241 YY1 TRANSFAC yes 118365706
chr1 149817284 149817290 GATA3 JASPAR yes 118365707
chr1 149817357 149817361 YY1 TRANSFAC yes 118365708
chr1 149817367 149817381 ONECUT1 JASPAR yes 118365709
chr1 149817367 149817381 ONECUT2 JASPAR yes 118365710
chr1 149817367 149817381 ONECUT3 JASPAR yes 118365711
chr1 149817368 149817378 PAX3 JASPAR yes 118365712
chr1 149817368 149817378 PAX7 JASPAR yes 118365713
chr1 149817368 149817379 PHOX2A JASPAR yes 118365714
chr1 149817368 149817379 PROP1 JASPAR yes 118365715
chr1 149817387 149817408 IRF1 JASPAR yes 118365716
chr1 149817389 149817404 IRF9 JASPAR yes 118365717
chr1 149817390 149817404 IRF8 JASPAR yes 118365718
chr1 149817391 149817406 PRDM1 JASPAR yes 118365719
chr1 149817404 149817414 GSC2 JASPAR yes 118365720
chr1 149817404 149817414 GSC JASPAR yes 118365721
chr1 149817405 149817413 OTX1 JASPAR yes 118365722
chr1 149817405 149817413 OTX2 JASPAR yes 118365723
chr1 149817405 149817414 PITX3 JASPAR yes 118365724
chr1 149817409 149817417 BARX1 JASPAR yes 118365725
chr1 149817431 149817441 NKX2-3 JASPAR yes 118365726
chr1 149817432 149817441 NKX2-8 JASPAR yes 118365727
chr1 149817441 149817451 MSC JASPAR yes 118365728
chr1 149817448 149817466 MAFF JASPAR yes 118365729
chr1 149817450 149817454 YY1 TRANSFAC yes 118365730
chr1 149817450 149817461 NRL JASPAR yes 118365731
chr1 149817450 149817465 MAFK JASPAR yes 118365732
chr1 149817458 149817469 BATF JASPAR yes 118365733
chr1 149817462 149817468 JUN TRANSFAC yes 118365734
chr1 149817480 149817486 PEA3 TRANSFAC yes 118365735
chr1 149817480 149817501 ZNF263 JASPAR yes 118365736
chr1 149817541 149817552 FOXA1 JASPAR yes 118365737
chr1 149817541 149817556 FOXA1 JASPAR yes 118365738
chr1 149817542 149817553 FOXB1 JASPAR yes 118365739
chr1 149817542 149817553 FOXC1 JASPAR yes 118365740
chr1 149817551 149817563 HNF1B JASPAR yes 118365741
chr1 149817552 149817566 SPIC JASPAR yes 118365742
chr1 149817558 149817565 SPI1 JASPAR yes 118365743
SNP sites on vista3237[chr1:149816287-149817606]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 149816436 rs186462584 A G
POLR2A SRF TEAD1
618815
chr1 149816657 rs188791016 C A
ONECUT3 POLR2A
618816
chr1 149816845 rs192859517 C T
GATA2 POLR2A
618817
chr1 149817038 rs72708145 T C
POLR2A
618818
chr1 149817065 rs1509899 T C
POLR2A
618819
chr1 149817098 rs587734639 G T
FOXC1 HNF4G NKX3-1 POLR2A TCF7L2
618820
chr1 149817343 rs587769800 G T
POLR2A
618821
chr1 149817349 rs587645700 T C
POLR2A
618822
chr1 149817350 rs587703134 A C
POLR2A
618823
chr1 149817368 rs144228842 G A
ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7 PHOX2A POLR2A PROP1
618824
chr1 149817375 rs74124036 A G
ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7 PHOX2A POLR2A PROP1
618825
chr1 149817389 rs148705813 G C
IRF1 IRF9 POLR2A
618826
chr1 149817508 rs1046332 T C
POLR2A
618827
chr1 149817581 rs201709001 CTG C
POLR2A
618828
Genes possibly regulated by vista3237[chr1:149816287-149817606]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149754227 149764074 + FCGR1A ENSG00000150337.9 149754227 0.81 0.96 1138 37940
chr1 149754245 149783928 - HIST2H2BF ENSG00000203814.5 149783928 0.95 0.94 1139 67641
chr1 149784826 149785236 - HIST2H3D ENSG00000183598.3 149785236 0.91 0.92 1140 68949
chr1 149804221 149811339 + HIST2H4A ENSG00000183941.8 149804221 0.94 0.91 1141 87934
chr1 149811110 149812765 - HIST2H3C ENSG00000203811.1 149812765 0.89 0.92 1142 96478
chr1 149813505 149814478 - HIST2H2AA3 ENSG00000183558.5 149814478 0.9 0.92 1143 98191
chr1 149822643 149823191 + HIST2H2AA4 ENSG00000203812.2 149822643 0.85 0.86 1144 94963
chr1 149824181 149825836 + HIST2H3A ENSG00000203852.3 149824181 0.89 0.92 1145 93425
chr1 149825607 149832714 - HIST2H4B ENSG00000182217.7 149832714 0.89 0.92 1146 84892
chr1 149856010 149858232 - HIST2H2BE ENSG00000184678.8 149858232 0.85 0.91 1147 59374
chr1 149858525 149858961 + HIST2H2AC ENSG00000184260.4 149858525 0.9 0.82 1148 59081
chr1 149859019 149859466 - HIST2H2AB ENSG00000184270.3 149859466 0.86 0.92 1149 58140
chr1 149859440 149872351 + BOLA1 ENSG00000178096.8 149859440 0.61 1.0 1150 58166
chr1 149874870 149889434 - SV2A ENSG00000159164.5 149889434 0.85 0.93 1151 28172
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 17370
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 8815
Expression level of Genes
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miRNAs possibly regulated by vista3237[chr1:149816287-149817606]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results