EnhancerDB
  1. Home
  2. Enhancers
  3. vista3238[chr1:149820361-149820952]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3238[chr1:149820361-149820952]
Back to top
Tissue distribution of vista3238
Back to top
Transcription factor that possibly regulate vista3238[chr1:149820361-149820952]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149820393 149820399 HiNF-A TRANSFAC yes 118365744
chr1 149820394 149820404 TFEC JASPAR yes 118365745
chr1 149820398 149820409 FOS JASPAR yes 118365746
chr1 149820399 149820408 JDP2 JASPAR yes 118365747
chr1 149820400 149820406 JUN TRANSFAC yes 118365748
chr1 149820401 149820412 CDX2 JASPAR yes 118365749
chr1 149820402 149820413 HOXA10 JASPAR yes 118365750
chr1 149820403 149820412 CDX1 JASPAR yes 118365751
chr1 149820410 149820420 SMAD3 JASPAR yes 118365752
chr1 149820421 149820428 NKX3-1 JASPAR yes 118365753
chr1 149820450 149820464 MTF1 JASPAR yes 118365754
chr1 149820455 149820469 RXRB JASPAR yes 118365755
chr1 149820455 149820470 HNF4A JASPAR yes 118365756
chr1 149820530 149820534 NFE TRANSFAC yes 118365757
chr1 149820530 149820537 MEIS1 JASPAR yes 118365758
chr1 149820544 149820549 GATA2 JASPAR yes 118365759
chr1 149820545 149820551 ZNF354C JASPAR yes 118365760
chr1 149820546 149820556 NKX2-3 JASPAR yes 118365761
chr1 149820547 149820556 NKX2-8 JASPAR yes 118365762
chr1 149820583 149820597 NR2F1 JASPAR yes 118365763
chr1 149820634 149820638 NFE TRANSFAC yes 118365764
chr1 149820635 149820640 GATA2 JASPAR yes 118365765
chr1 149820651 149820662 FOXA1 JASPAR yes 118365766
chr1 149820651 149820666 FOXA1 JASPAR yes 118365767
chr1 149820660 149820665 MYC TRANSFAC yes 118365768
chr1 149820709 149820724 RFX5 JASPAR yes 118365769
chr1 149820717 149820725 TBX5 JASPAR yes 118365770
chr1 149820739 149820753 GATA2 JASPAR yes 118365771
chr1 149820741 149820749 GATA3 JASPAR yes 118365772
chr1 149820752 149820762 MYF6 JASPAR yes 118365773
chr1 149820752 149820762 NEUROG2 JASPAR yes 118365774
chr1 149820754 149820758 YY1 TRANSFAC yes 118365775
chr1 149820756 149820771 STAT2 JASPAR yes 118365776
chr1 149820758 149820766 FOXO3 JASPAR yes 118365777
chr1 149820758 149820768 NFATC3 JASPAR yes 118365778
chr1 149820764 149820768 YY1 TRANSFAC yes 118365779
chr1 149820791 149820795 YY1 TRANSFAC yes 118365780
chr1 149820795 149820800 GATA2 JASPAR yes 118365781
chr1 149820804 149820817 EOMES JASPAR yes 118365782
chr1 149820806 149820816 TBR1 JASPAR yes 118365783
chr1 149820806 149820817 TBX20 JASPAR yes 118365784
chr1 149820806 149820817 TBX2 JASPAR yes 118365785
chr1 149820807 149820817 TBX21 JASPAR yes 118365786
chr1 149820808 149820816 MGA JASPAR yes 118365787
chr1 149820808 149820816 TBX15 JASPAR yes 118365788
chr1 149820808 149820816 TBX1 JASPAR yes 118365789
chr1 149820808 149820816 TBX4 JASPAR yes 118365790
chr1 149820808 149820816 TBX5 JASPAR yes 118365791
chr1 149820811 149820825 POU1F1 JASPAR yes 118365792
chr1 149820812 149820824 POU3F1 JASPAR yes 118365793
chr1 149820812 149820824 POU3F2 JASPAR yes 118365794
chr1 149820812 149820825 POU3F3 JASPAR yes 118365795
chr1 149820813 149820825 POU2F1 JASPAR yes 118365796
chr1 149820814 149820823 POU3F4 JASPAR yes 118365797
chr1 149820814 149820823 POU5F1B JASPAR yes 118365798
chr1 149820832 149820848 ZNF143 JASPAR yes 118365799
chr1 149820845 149820848 MYB TRANSFAC yes 118365800
chr1 149820854 149820870 ZNF143 JASPAR yes 118365801
chr1 149820865 149820874 NF-kappaB TRANSFAC yes 118365802
chr1 149820865 149820875 NFKB1 JASPAR yes 118365803
chr1 149820865 149820875 REL JASPAR yes 118365804
chr1 149820865 149820876 NFKB1 JASPAR yes 118365805
chr1 149820865 149820886 IRF1 JASPAR yes 118365806
chr1 149820866 149820879 POU2F2 JASPAR yes 118365807
chr1 149820867 149820882 PRDM1 JASPAR yes 118365808
chr1 149820869 149820881 IRF1 JASPAR yes 118365809
chr1 149820869 149820883 IRF7 JASPAR yes 118365810
chr1 149820869 149820884 IRF9 JASPAR yes 118365811
chr1 149820871 149820886 MEF2C JASPAR yes 118365812
chr1 149820872 149820884 MEF2D JASPAR yes 118365813
chr1 149820874 149820878 YY1 TRANSFAC yes 118365814
chr1 149820883 149820886 MYB TRANSFAC yes 118365815
chr1 149820890 149820908 MAFF JASPAR yes 118365816
chr1 149820892 149820903 NRL JASPAR yes 118365817
chr1 149820892 149820907 MAFK JASPAR yes 118365818
SNP sites on vista3238[chr1:149820361-149820952]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 149820399 rs373656885 CAT C
FOS HiNF-A JDP2 TFEC
618843
chr1 149820458 rs57071626 G A
HNF4A MTF1 RXRB
618844
chr1 149820656 rs12119601 G C
FOXA1
618845
chr1 149820776 rs75737534 T C no 618846
chr1 149820836 rs59793768 C G
ZNF143
618847
chr1 149820893 rs183221503 G T
MAFF MAFK NRL
618848
chr1 149820909 rs138445419 T C no 618849
Genes possibly regulated by vista3238[chr1:149820361-149820952]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149754227 149764074 + FCGR1A ENSG00000150337.9 149754227 0.81 0.96 1138 33866
chr1 149754245 149783928 - HIST2H2BF ENSG00000203814.5 149783928 0.95 0.94 1139 63567
chr1 149784826 149785236 - HIST2H3D ENSG00000183598.3 149785236 0.91 0.92 1140 64875
chr1 149804221 149811339 + HIST2H4A ENSG00000183941.8 149804221 0.94 0.91 1141 83860
chr1 149811110 149812765 - HIST2H3C ENSG00000203811.1 149812765 0.89 0.92 1142 92404
chr1 149813505 149814478 - HIST2H2AA3 ENSG00000183558.5 149814478 0.9 0.92 1143 94117
chr1 149822643 149823191 + HIST2H2AA4 ENSG00000203812.2 149822643 0.85 0.86 1144 98309
chr1 149824181 149825836 + HIST2H3A ENSG00000203852.3 149824181 0.89 0.92 1145 96771
chr1 149825607 149832714 - HIST2H4B ENSG00000182217.7 149832714 0.89 0.92 1146 88238
chr1 149856010 149858232 - HIST2H2BE ENSG00000184678.8 149858232 0.85 0.91 1147 62720
chr1 149858525 149858961 + HIST2H2AC ENSG00000184260.4 149858525 0.9 0.82 1148 62427
chr1 149859019 149859466 - HIST2H2AB ENSG00000184270.3 149859466 0.86 0.92 1149 61486
chr1 149859440 149872351 + BOLA1 ENSG00000178096.8 149859440 0.61 1.0 1150 61512
chr1 149874870 149889434 - SV2A ENSG00000159164.5 149889434 0.85 0.93 1151 31518
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 20716
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 12161
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3238[chr1:149820361-149820952]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results