EnhancerDB
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  3. vista3239[chr1:149821015-149821647]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3239[chr1:149821015-149821647]
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Tissue distribution of vista3239
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Transcription factor that possibly regulate vista3239[chr1:149821015-149821647]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149821030 149821034 TEAD2 TRANSFAC yes 118365819
chr1 149821035 149821039 YY1 TRANSFAC yes 118365820
chr1 149821037 149821048 RUNX1 JASPAR yes 118365821
chr1 149821044 149821054 GSX1 JASPAR yes 118365822
chr1 149821044 149821054 GSX2 JASPAR yes 118365823
chr1 149821044 149821054 HOXA2 JASPAR yes 118365824
chr1 149821044 149821054 MEOX1 JASPAR yes 118365825
chr1 149821044 149821054 NOTO JASPAR yes 118365826
chr1 149821045 149821053 NKX6-1 JASPAR yes 118365827
chr1 149821045 149821053 NKX6-2 JASPAR yes 118365828
chr1 149821045 149821055 POU6F2 JASPAR yes 118365829
chr1 149821062 149821078 SOX4 JASPAR yes 118365830
chr1 149821063 149821078 SOX21 JASPAR yes 118365831
chr1 149821082 149821097 FOXP1 JASPAR yes 118365832
chr1 149821085 149821096 FOXP2 JASPAR yes 118365833
chr1 149821087 149821096 SRY JASPAR yes 118365834
chr1 149821092 149821105 DUXA JASPAR yes 118365835
chr1 149821093 149821104 DUX4 JASPAR yes 118365836
chr1 149821117 149821129 ZBTB7B JASPAR yes 118365837
chr1 149821117 149821129 ZBTB7C JASPAR yes 118365838
chr1 149821123 149821127 H4TF2 TRANSFAC yes 118365839
chr1 149821130 149821149 REST JASPAR yes 118365840
chr1 149821171 149821175 YY1 TRANSFAC yes 118365841
chr1 149821173 149821179 TCF4 TRANSFAC yes 118365842
chr1 149821174 149821189 RFX5 JASPAR yes 118365843
chr1 149821205 149821223 NR3C1 JASPAR yes 118365844
chr1 149821217 149821223 ETS1 JASPAR yes 118365845
chr1 149821228 149821231 MYB TRANSFAC yes 118365846
chr1 149821235 149821240 TFAP2A TRANSFAC yes 118365847
chr1 149821235 149821241 MZF1 JASPAR yes 118365848
chr1 149821246 149821256 BARHL2 JASPAR yes 118365849
chr1 149821248 149821252 YY1 TRANSFAC yes 118365850
chr1 149821276 149821281 GATA1 TRANSFAC yes 118365851
chr1 149821298 149821310 MYBL1 JASPAR yes 118365852
chr1 149821312 149821315 MYB TRANSFAC yes 118365853
chr1 149821353 149821358 ETS2 TRANSFAC yes 118365854
chr1 149821353 149821363 TEAD4 JASPAR yes 118365855
chr1 149821354 149821365 NFKB1 JASPAR yes 118365856
chr1 149821378 149821398 TBX19 JASPAR yes 118365857
chr1 149821380 149821390 MAX JASPAR yes 118365858
chr1 149821380 149821392 HES5 JASPAR yes 118365859
chr1 149821380 149821392 HES7 JASPAR yes 118365860
chr1 149821381 149821391 BHLHE40 JASPAR yes 118365861
chr1 149821381 149821391 BHLHE41 JASPAR yes 118365862
chr1 149821381 149821391 CLOCK JASPAR yes 118365863
chr1 149821381 149821391 HEY1 JASPAR yes 118365864
chr1 149821381 149821391 HEY2 JASPAR yes 118365865
chr1 149821381 149821391 MAX JASPAR yes 118365866
chr1 149821381 149821391 MLXIPL JASPAR yes 118365867
chr1 149821381 149821391 MLX JASPAR yes 118365868
chr1 149821381 149821391 MNT JASPAR yes 118365869
chr1 149821381 149821391 TFE3 JASPAR yes 118365870
chr1 149821381 149821391 TFEB JASPAR yes 118365871
chr1 149821381 149821391 TFEC JASPAR yes 118365872
chr1 149821382 149821392 MAX JASPAR yes 118365873
chr1 149821383 149821388 MYC TRANSFAC yes 118365874
chr1 149821383 149821388 USF1 TRANSFAC yes 118365875
chr1 149821383 149821388 USF2 TRANSFAC yes 118365876
chr1 149821392 149821408 NFYA JASPAR yes 118365877
chr1 149821397 149821401 H1TF2 TRANSFAC yes 118365878
chr1 149821397 149821401 NFE TRANSFAC yes 118365879
chr1 149821397 149821401 SRF TRANSFAC yes 118365880
chr1 149821404 149821408 TEAD2 TRANSFAC yes 118365881
chr1 149821404 149821409 TBP TRANSFAC yes 118365882
chr1 149821404 149821410 TFIID TRANSFAC yes 118365883
chr1 149821427 149821439 SRF JASPAR yes 118365884
chr1 149821434 149821438 TEAD2 TRANSFAC yes 118365885
chr1 149821434 149821439 TBP TRANSFAC yes 118365886
chr1 149821434 149821440 TFIID TRANSFAC yes 118365887
chr1 149821450 149821468 SRF JASPAR yes 118365888
chr1 149821451 149821465 TCF7L2 JASPAR yes 118365889
chr1 149821457 149821472 FOXA1 JASPAR yes 118365890
chr1 149821458 149821465 NKX3-1 JASPAR yes 118365891
chr1 149821485 149821489 YY1 TRANSFAC yes 118365892
chr1 149821502 149821506 YY1 TRANSFAC yes 118365893
chr1 149821530 149821536 LEF1 TRANSFAC yes 118365894
chr1 149821530 149821536 SOX10 JASPAR yes 118365895
chr1 149821552 149821563 NFIL3 JASPAR yes 118365896
chr1 149821553 149821565 HLF JASPAR yes 118365897
chr1 149821575 149821578 MYB TRANSFAC yes 118365898
chr1 149821591 149821602 ETV2 JASPAR yes 118365899
chr1 149821592 149821602 ETS1 JASPAR yes 118365900
chr1 149821592 149821603 FLI1 JASPAR yes 118365901
chr1 149821595 149821604 SRY JASPAR yes 118365902
chr1 149821609 149821613 LFA1 TRANSFAC yes 118365903
chr1 149821625 149821633 GMEB2 JASPAR yes 118365904
chr1 149821626 149821638 CREB1 JASPAR yes 118365905
chr1 149821628 149821638 HMBOX1 JASPAR yes 118365906
chr1 149821630 149821633 MYB TRANSFAC yes 118365907
SNP sites on vista3239[chr1:149821015-149821647]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 149821019 rs72708146 C T no 618850
chr1 149821210 rs185222842 G C
NR3C1
618851
chr1 149821237 rs189649826 G A
MZF1 TFAP2A
618852
chr1 149821431 rs141949502 C T
SRF
618853
chr1 149821454 rs587771999 C T
SRF TCF7L2
618854
chr1 149821462 rs587672827 G A
FOXA1 NKX3-1 SRF TCF7L2
618855
chr1 149821585 rs377020862 G A,C no 618856
Genes possibly regulated by vista3239[chr1:149821015-149821647]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149754227 149764074 + FCGR1A ENSG00000150337.9 149754227 0.81 0.96 1138 33212
chr1 149754245 149783928 - HIST2H2BF ENSG00000203814.5 149783928 0.95 0.94 1139 62913
chr1 149784826 149785236 - HIST2H3D ENSG00000183598.3 149785236 0.91 0.92 1140 64221
chr1 149804221 149811339 + HIST2H4A ENSG00000183941.8 149804221 0.94 0.91 1141 83206
chr1 149811110 149812765 - HIST2H3C ENSG00000203811.1 149812765 0.89 0.92 1142 91750
chr1 149813505 149814478 - HIST2H2AA3 ENSG00000183558.5 149814478 0.9 0.92 1143 93463
chr1 149822643 149823191 + HIST2H2AA4 ENSG00000203812.2 149822643 0.85 0.86 1144 99004
chr1 149824181 149825836 + HIST2H3A ENSG00000203852.3 149824181 0.89 0.92 1145 97466
chr1 149825607 149832714 - HIST2H4B ENSG00000182217.7 149832714 0.89 0.92 1146 88933
chr1 149856010 149858232 - HIST2H2BE ENSG00000184678.8 149858232 0.85 0.91 1147 63415
chr1 149858525 149858961 + HIST2H2AC ENSG00000184260.4 149858525 0.9 0.82 1148 63122
chr1 149859019 149859466 - HIST2H2AB ENSG00000184270.3 149859466 0.86 0.92 1149 62181
chr1 149859440 149872351 + BOLA1 ENSG00000178096.8 149859440 0.61 1.0 1150 62207
chr1 149874870 149889434 - SV2A ENSG00000159164.5 149889434 0.85 0.93 1151 32213
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 21411
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 12856
Expression level of Genes
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miRNAs possibly regulated by vista3239[chr1:149821015-149821647]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results