EnhancerDB
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  3. vista3240[chr1:149853331-149853687]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3240[chr1:149853331-149853687]
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Tissue distribution of vista3240
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Transcription factor that possibly regulate vista3240[chr1:149853331-149853687]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149853318 149853332 STAT1 JASPAR yes 32122476
chr1 149853318 149853332 STAT1 JASPAR yes 118365908
chr1 149853318 149853336 IRF2 JASPAR yes 32122477
chr1 149853318 149853336 IRF2 JASPAR yes 118365909
chr1 149853322 149853337 IRF9 JASPAR yes 32122478
chr1 149853322 149853337 IRF9 JASPAR yes 118365910
chr1 149853331 149853344 DUXA JASPAR yes 32122479
chr1 149853331 149853344 DUXA JASPAR yes 118365911
chr1 149853332 149853343 DUX4 JASPAR yes 32122480
chr1 149853332 149853343 PHOX2A JASPAR yes 32122481
chr1 149853332 149853343 PROP1 JASPAR yes 32122482
chr1 149853332 149853343 DUX4 JASPAR yes 118365912
chr1 149853332 149853343 PHOX2A JASPAR yes 118365913
chr1 149853332 149853343 PROP1 JASPAR yes 118365914
chr1 149853349 149853356 NKX3-1 JASPAR yes 32122483
chr1 149853349 149853356 NKX3-1 JASPAR yes 118365915
chr1 149853355 149853359 H1TF2 TRANSFAC yes 32122484
chr1 149853355 149853359 NFE TRANSFAC yes 32122485
chr1 149853355 149853359 SRF TRANSFAC yes 32122486
chr1 149853355 149853359 H1TF2 TRANSFAC yes 118365916
chr1 149853355 149853359 NFE TRANSFAC yes 118365917
chr1 149853355 149853359 SRF TRANSFAC yes 118365918
chr1 149853407 149853426 REST JASPAR yes 118365919
chr1 149853436 149853450 PLAG1 JASPAR yes 118365920
chr1 149853442 149853448 ZNF354C JASPAR yes 118365921
chr1 149853445 149853461 ZNF143 JASPAR yes 118365922
chr1 149853468 149853479 TBX20 JASPAR yes 118365923
chr1 149853477 149853491 STAT1 JASPAR yes 118365924
chr1 149853489 149853493 TEAD2 TRANSFAC yes 118365925
chr1 149853490 149853500 POU6F2 JASPAR yes 118365926
chr1 149853500 149853515 ZIC3 JASPAR yes 118365927
chr1 149853502 149853511 SNAI2 JASPAR yes 118365928
chr1 149853503 149853508 USF2 TRANSFAC yes 118365929
chr1 149853520 149853531 USF1 JASPAR yes 118365930
chr1 149853520 149853531 USF2 JASPAR yes 118365931
chr1 149853558 149853569 NFE2L2 JASPAR yes 118365932
chr1 149853561 149853567 SOX10 JASPAR yes 118365933
chr1 149853568 149853572 YY1 TRANSFAC yes 118365934
chr1 149853581 149853592 NFKB1 JASPAR yes 118365935
chr1 149853582 149853587 ETS2 TRANSFAC yes 118365936
chr1 149853600 149853612 FOXI1 JASPAR yes 118365937
chr1 149853604 149853610 HiNF-A TRANSFAC yes 118365938
chr1 149853616 149853626 RORA JASPAR yes 118365939
chr1 149853618 149853633 HNF4G JASPAR yes 118365940
chr1 149853618 149853633 NR2C2 JASPAR yes 118365941
chr1 149853619 149853633 NR2F1 JASPAR yes 118365942
chr1 149853619 149853633 RXRB JASPAR yes 118365943
chr1 149853619 149853633 RXRG JASPAR yes 118365944
chr1 149853619 149853634 HNF4A JASPAR yes 118365945
chr1 149853621 149853625 ESR1 TRANSFAC yes 118365946
chr1 149853627 149853631 H4TF2 TRANSFAC yes 118365947
chr1 149853636 149853651 HSF1 JASPAR yes 118365948
chr1 149853644 149853660 ZNF143 JASPAR yes 118365949
chr1 149853652 149853661 HIC2 JASPAR yes 118365950
chr1 149853655 149853659 LFA1 TRANSFAC yes 118365951
chr1 149853663 149853673 NEUROD2 JASPAR yes 118365952
chr1 149853663 149853674 USF1 JASPAR yes 118365953
chr1 149853663 149853674 USF2 JASPAR yes 118365954
chr1 149853663 149853675 TAL1 JASPAR yes 118365955
chr1 149853664 149853674 MAX JASPAR yes 118365956
chr1 149853664 149853676 GLI2 JASPAR yes 118365957
chr1 149853668 149853686 ESR1 JASPAR yes 118365958
chr1 149853676 149853683 JUN TRANSFAC yes 118365959
chr1 149853676 149853683 SP1 TRANSFAC yes 118365960
SNP sites on vista3240[chr1:149853331-149853687]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 149853428 rs181604038 T C no 618935
chr1 149853645 rs16837629 A G
HSF1 ZNF143
618936
Genes possibly regulated by vista3240[chr1:149853331-149853687]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149754227 149764074 + FCGR1A ENSG00000150337.9 149754227 0.81 0.96 1138 896
chr1 149754245 149783928 - HIST2H2BF ENSG00000203814.5 149783928 0.95 0.94 1139 30597
chr1 149784826 149785236 - HIST2H3D ENSG00000183598.3 149785236 0.91 0.92 1140 31905
chr1 149804221 149811339 + HIST2H4A ENSG00000183941.8 149804221 0.94 0.91 1141 50890
chr1 149811110 149812765 - HIST2H3C ENSG00000203811.1 149812765 0.89 0.92 1142 59434
chr1 149813505 149814478 - HIST2H2AA3 ENSG00000183558.5 149814478 0.9 0.92 1143 61147
chr1 149822643 149823191 + HIST2H2AA4 ENSG00000203812.2 149822643 0.85 0.86 1144 69312
chr1 149824181 149825836 + HIST2H3A ENSG00000203852.3 149824181 0.89 0.92 1145 70850
chr1 149825607 149832714 - HIST2H4B ENSG00000182217.7 149832714 0.89 0.92 1146 79383
chr1 149856010 149858232 - HIST2H2BE ENSG00000184678.8 149858232 0.85 0.91 1147 95455
chr1 149858525 149858961 + HIST2H2AC ENSG00000184260.4 149858525 0.9 0.82 1148 95162
chr1 149859019 149859466 - HIST2H2AB ENSG00000184270.3 149859466 0.86 0.92 1149 94221
chr1 149859440 149872351 + BOLA1 ENSG00000178096.8 149859440 0.61 1.0 1150 94247
chr1 149874870 149889434 - SV2A ENSG00000159164.5 149889434 0.85 0.93 1151 64253
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 53451
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 44896
Expression level of Genes
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miRNAs possibly regulated by vista3240[chr1:149853331-149853687]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results