EnhancerDB
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  3. vista3241[chr1:149888481-149888615]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3241[chr1:149888481-149888615]
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Tissue distribution of vista3241
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Transcription factor that possibly regulate vista3241[chr1:149888481-149888615]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149888518 149888533 TP53 JASPAR yes 118365961
chr1 149888537 149888542 SP1 TRANSFAC yes 118365962
chr1 149888537 149888543 SP1 TRANSFAC yes 118365963
chr1 149888540 149888558 MAFF JASPAR yes 118365964
chr1 149888541 149888556 MAFK JASPAR yes 118365965
chr1 149888543 149888547 NFE TRANSFAC yes 118365966
chr1 149888545 149888556 NRL JASPAR yes 118365967
chr1 149888550 149888554 YY1 TRANSFAC yes 118365968
chr1 149888557 149888569 ZBTB7A JASPAR yes 118365969
chr1 149888558 149888570 ZBTB7B JASPAR yes 118365970
chr1 149888558 149888570 ZBTB7C JASPAR yes 118365971
chr1 149888560 149888580 RREB1 JASPAR yes 118365972
chr1 149888561 149888571 SP1 JASPAR yes 118365973
chr1 149888561 149888571 ZNF740 JASPAR yes 118365974
chr1 149888562 149888582 RREB1 JASPAR yes 118365975
chr1 149888563 149888573 ZNF740 JASPAR yes 118365976
chr1 149888565 149888586 ZNF263 JASPAR yes 118365977
chr1 149888599 149888610 NFKB1 JASPAR yes 118365978
chr1 149888600 149888610 REL JASPAR yes 118365979
chr1 149888600 149888611 NFKB1 JASPAR yes 118365980
chr1 149888601 149888611 REL JASPAR yes 118365981
SNP sites on vista3241[chr1:149888481-149888615]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 149888499 rs587724224 G C no 619085
chr1 149888517 rs181749319 C T no 619086
chr1 149888525 rs587721291 A G
TP53
619087
chr1 149888561 rs114254667 G A
RREB1 SP1 ZBTB7A ZBTB7B ZBTB7C ZNF740
619088
Genes possibly regulated by vista3241[chr1:149888481-149888615]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149804221 149811339 + HIST2H4A ENSG00000183941.8 149804221 0.94 0.91 1141 15740
chr1 149811110 149812765 - HIST2H3C ENSG00000203811.1 149812765 0.89 0.92 1142 24284
chr1 149813505 149814478 - HIST2H2AA3 ENSG00000183558.5 149814478 0.9 0.92 1143 25997
chr1 149822643 149823191 + HIST2H2AA4 ENSG00000203812.2 149822643 0.85 0.86 1144 34162
chr1 149824181 149825836 + HIST2H3A ENSG00000203852.3 149824181 0.89 0.92 1145 35700
chr1 149825607 149832714 - HIST2H4B ENSG00000182217.7 149832714 0.89 0.92 1146 44233
chr1 149856010 149858232 - HIST2H2BE ENSG00000184678.8 149858232 0.85 0.91 1147 69751
chr1 149858525 149858961 + HIST2H2AC ENSG00000184260.4 149858525 0.9 0.82 1148 70044
chr1 149859019 149859466 - HIST2H2AB ENSG00000184270.3 149859466 0.86 0.92 1149 70985
chr1 149859440 149872351 + BOLA1 ENSG00000178096.8 149859440 0.61 1.0 1150 70959
chr1 149874870 149889434 - SV2A ENSG00000159164.5 149889434 0.85 0.93 1151 99181
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 88379
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 79824
chr1 149909705 149982625 - OTUD7B ENSG00000163113.10 149982625 0.69 1.0 1154 5990
Expression level of Genes
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miRNAs possibly regulated by vista3241[chr1:149888481-149888615]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results