EnhancerDB
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  3. vista3248[chr1:149989448-149989604]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3248[chr1:149989448-149989604]
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Tissue distribution of vista3248
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Transcription factor that possibly regulate vista3248[chr1:149989448-149989604]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 149989375 149989903 ESR1 UCSC Txn Factor no Conserved 107827836
chr1 149989458 149989468 ALX3 JASPAR yes 32127396
chr1 149989458 149989468 EN2 JASPAR yes 32127397
chr1 149989458 149989468 GBX2 JASPAR yes 32127398
chr1 149989458 149989468 LBX2 JASPAR yes 32127399
chr1 149989458 149989468 MIXL1 JASPAR yes 32127400
chr1 149989458 149989468 ALX3 JASPAR yes 118366311
chr1 149989458 149989468 EN2 JASPAR yes 118366312
chr1 149989458 149989468 GBX2 JASPAR yes 118366313
chr1 149989458 149989468 LBX2 JASPAR yes 118366314
chr1 149989458 149989468 MIXL1 JASPAR yes 118366315
chr1 149989459 149989467 BARX1 JASPAR yes 32127401
chr1 149989459 149989467 BSX JASPAR yes 32127402
chr1 149989459 149989467 EN1 JASPAR yes 32127403
chr1 149989459 149989467 ISX JASPAR yes 32127404
chr1 149989459 149989467 LHX9 JASPAR yes 32127405
chr1 149989459 149989467 MSX1 JASPAR yes 32127406
chr1 149989459 149989467 MSX2 JASPAR yes 32127407
chr1 149989459 149989467 PRRX1 JASPAR yes 32127408
chr1 149989459 149989467 RAX2 JASPAR yes 32127409
chr1 149989459 149989467 SHOX JASPAR yes 32127410
chr1 149989459 149989467 BARX1 JASPAR yes 118366316
chr1 149989459 149989467 BSX JASPAR yes 118366317
chr1 149989459 149989467 EN1 JASPAR yes 118366318
chr1 149989459 149989467 ISX JASPAR yes 118366319
chr1 149989459 149989467 LHX9 JASPAR yes 118366320
chr1 149989459 149989467 MSX1 JASPAR yes 118366321
chr1 149989459 149989467 MSX2 JASPAR yes 118366322
chr1 149989459 149989467 PRRX1 JASPAR yes 118366323
chr1 149989459 149989467 RAX2 JASPAR yes 118366324
chr1 149989459 149989467 SHOX JASPAR yes 118366325
chr1 149989461 149989473 TEAD1 JASPAR yes 32127411
chr1 149989461 149989473 TEAD1 JASPAR yes 118366326
chr1 149989463 149989473 TEAD1 JASPAR yes 32127412
chr1 149989463 149989473 TEAD4 JASPAR yes 32127413
chr1 149989463 149989473 TEAD1 JASPAR yes 118366327
chr1 149989463 149989473 TEAD4 JASPAR yes 118366328
chr1 149989464 149989472 TEAD3 JASPAR yes 32127414
chr1 149989464 149989472 TEAD3 JASPAR yes 118366329
chr1 149989465 149989479 RORA JASPAR yes 32127415
chr1 149989465 149989479 RORA JASPAR yes 118366330
chr1 149989468 149989478 RORA JASPAR yes 32127416
chr1 149989468 149989478 RORA JASPAR yes 118366331
chr1 149989473 149989477 ESR1 TRANSFAC yes 32127417
chr1 149989473 149989477 ESR1 TRANSFAC yes 118366332
chr1 149989473 149989484 USF1 JASPAR yes 32127418
chr1 149989473 149989484 USF1 JASPAR yes 118366333
chr1 149989476 149989485 ZEB1 JASPAR yes 32127419
chr1 149989476 149989485 ZEB1 JASPAR yes 118366334
chr1 149989478 149989483 SP1 TRANSFAC yes 32127420
chr1 149989478 149989483 SP1 TRANSFAC yes 118366335
chr1 149989478 149989496 MAFF JASPAR yes 32127421
chr1 149989478 149989496 MAFF JASPAR yes 118366336
chr1 149989479 149989497 ESR2 JASPAR yes 32127422
chr1 149989479 149989497 ESR2 JASPAR yes 118366337
chr1 149989480 149989486 ESR1 TRANSFAC yes 32127423
chr1 149989480 149989486 ESR1 TRANSFAC yes 118366338
chr1 149989480 149989497 ESR1 JASPAR yes 32127424
chr1 149989480 149989497 ESR1 JASPAR yes 118366339
chr1 149989481 149989496 ESR2 JASPAR yes 32127425
chr1 149989481 149989496 ESR2 JASPAR yes 118366340
chr1 149989482 149989486 ESR1 TRANSFAC yes 32127426
chr1 149989482 149989486 ESR1 TRANSFAC yes 118366341
chr1 149989501 149989513 PKNOX1 JASPAR yes 32127427
chr1 149989501 149989513 PKNOX2 JASPAR yes 32127428
chr1 149989501 149989513 TGIF1 JASPAR yes 32127429
chr1 149989501 149989513 TGIF2 JASPAR yes 32127430
chr1 149989501 149989513 PKNOX1 JASPAR yes 118366342
chr1 149989501 149989513 PKNOX2 JASPAR yes 118366343
chr1 149989501 149989513 TGIF1 JASPAR yes 118366344
chr1 149989501 149989513 TGIF2 JASPAR yes 118366345
chr1 149989525 149989531 PEA3 TRANSFAC yes 32127431
chr1 149989525 149989531 PEA3 TRANSFAC yes 118366346
chr1 149989536 149989543 NKX3-1 JASPAR yes 32127432
chr1 149989536 149989543 NKX3-1 JASPAR yes 118366347
chr1 149989571 149989591 TP53 JASPAR yes 32127433
chr1 149989571 149989591 TP53 JASPAR yes 118366348
chr1 149989593 149989613 ESR1 JASPAR yes 32127434
chr1 149989593 149989613 ESR1 JASPAR yes 118366349
chr1 149989595 149989601 SOX10 JASPAR yes 32127435
chr1 149989595 149989601 SOX10 JASPAR yes 118366350
chr1 149989595 149989615 PPARG JASPAR yes 32127436
chr1 149989595 149989615 PPARG JASPAR yes 118366351
chr1 149989596 149989614 ESR1 JASPAR yes 32127437
chr1 149989596 149989614 ESR2 JASPAR yes 32127438
chr1 149989596 149989614 ESR1 JASPAR yes 118366352
chr1 149989596 149989614 ESR2 JASPAR yes 118366353
chr1 149989597 149989615 ESR2 JASPAR yes 32127439
chr1 149989597 149989615 ESR2 JASPAR yes 118366354
chr1 149989598 149989613 ESR2 JASPAR yes 32127440
chr1 149989598 149989613 ESR2 JASPAR yes 118366355
chr1 149989598 149989618 ESR1 JASPAR yes 32127441
chr1 149989598 149989618 ESR1 JASPAR yes 118366356
SNP sites on vista3248[chr1:149989448-149989604]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3248[chr1:149989448-149989604]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 149895209 149900236 - SF3B4 ENSG00000143368.9 149900236 0.67 0.99 1152 10788
chr1 149900543 149908791 - MTMR11 ENSG00000014914.15 149908791 0.82 1.0 1153 19343
chr1 149909705 149982625 - OTUD7B ENSG00000163113.10 149982625 0.69 1.0 1154 93177
chr1 150039369 150117505 + VPS45 ENSG00000136631.8 150039369 0.67 0.99 1155 50235
Expression level of Genes
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miRNAs possibly regulated by vista3248[chr1:149989448-149989604]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results