EnhancerDB
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  3. vista3249[chr1:150134154-150134397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3249[chr1:150134154-150134397]
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Tissue distribution of vista3249
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Transcription factor that possibly regulate vista3249[chr1:150134154-150134397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 150131308 150136452 POLR2A UCSC Txn Factor no Conserved 107827838
chr1 150131308 150136452 POLR2A UCSC Txn Factor no Conserved 107827839
chr1 150134371 150134795 CTCF UCSC Txn Factor no Conserved 107827849
chr1 150134161 150134164 MYB TRANSFAC yes 32134257
chr1 150134161 150134164 MYB TRANSFAC yes 118366357
chr1 150134170 150134184 SPI1 JASPAR yes 32134258
chr1 150134170 150134184 SPI1 JASPAR yes 118366358
chr1 150134192 150134196 LFA1 TRANSFAC yes 32134259
chr1 150134192 150134196 LFA1 TRANSFAC yes 118366359
chr1 150134197 150134207 MAX JASPAR yes 32134260
chr1 150134197 150134207 MAX JASPAR yes 118366360
chr1 150134197 150134209 HES5 JASPAR yes 32134261
chr1 150134197 150134209 HES5 JASPAR yes 118366361
chr1 150134207 150134213 ETS1 JASPAR yes 32134262
chr1 150134207 150134213 ETS1 JASPAR yes 118366362
chr1 150134212 150134226 STAT1 JASPAR yes 32134263
chr1 150134212 150134226 STAT1 JASPAR yes 118366363
chr1 150134213 150134227 IRF8 JASPAR yes 32134264
chr1 150134213 150134227 IRF8 JASPAR yes 118366364
chr1 150134213 150134228 IRF9 JASPAR yes 32134265
chr1 150134213 150134228 IRF9 JASPAR yes 118366365
chr1 150134221 150134235 TCF7L2 JASPAR yes 32134266
chr1 150134221 150134235 TCF7L2 JASPAR yes 118366366
chr1 150134255 150134276 ZNF263 JASPAR yes 32134267
chr1 150134255 150134276 ZNF263 JASPAR yes 118366367
chr1 150134265 150134277 POU2F1 JASPAR yes 32134268
chr1 150134265 150134277 POU2F1 JASPAR yes 118366368
chr1 150134267 150134277 NFATC3 JASPAR yes 32134269
chr1 150134267 150134277 NFATC3 JASPAR yes 118366369
chr1 150134269 150134276 NFATC2 JASPAR yes 32134270
chr1 150134269 150134276 NFATC2 JASPAR yes 118366370
chr1 150134279 150134283 NFE TRANSFAC yes 32134271
chr1 150134279 150134283 NFE TRANSFAC yes 118366371
chr1 150134325 150134334 THAP1 JASPAR yes 32134272
chr1 150134325 150134334 THAP1 JASPAR yes 118366372
chr1 150134328 150134332 LFA1 TRANSFAC yes 32134273
chr1 150134328 150134332 LFA1 TRANSFAC yes 118366373
chr1 150134347 150134352 MYC TRANSFAC yes 32134274
chr1 150134347 150134352 MYC TRANSFAC yes 118366374
chr1 150134353 150134374 ZNF263 JASPAR yes 32134275
chr1 150134353 150134374 ZNF263 JASPAR yes 118366375
chr1 150134355 150134371 ZNF143 JASPAR yes 32134276
chr1 150134355 150134371 ZNF143 JASPAR yes 118366376
chr1 150134366 150134381 JUND JASPAR yes 32134277
chr1 150134366 150134381 JUND JASPAR yes 118366377
chr1 150134367 150134380 JUN JASPAR yes 32134278
chr1 150134367 150134380 JUN JASPAR yes 118366378
chr1 150134381 150134391 SP1 JASPAR yes 32134279
chr1 150134381 150134391 SP1 JASPAR yes 118366379
chr1 150134382 150134402 ESR1 JASPAR yes 32134280
chr1 150134382 150134402 ESR1 JASPAR yes 118366380
chr1 150134383 150134388 SP1 TRANSFAC yes 32134281
chr1 150134383 150134388 SP1 TRANSFAC yes 118366381
chr1 150134385 150134403 ESR2 JASPAR yes 32134282
chr1 150134385 150134403 ESR2 JASPAR yes 118366382
chr1 150134386 150134404 ESR1 JASPAR yes 32134283
chr1 150134386 150134404 ESR1 JASPAR yes 118366383
chr1 150134387 150134402 ESR2 JASPAR yes 32134284
chr1 150134387 150134402 ESR2 JASPAR yes 118366384
chr1 150134387 150134407 ESR1 JASPAR yes 32134285
chr1 150134387 150134407 ESR1 JASPAR yes 118366385
chr1 150134388 150134392 ESR1 TRANSFAC yes 32134286
chr1 150134388 150134392 ESR1 TRANSFAC yes 118366386
chr1 150134393 150134397 NFE TRANSFAC yes 32134287
chr1 150134393 150134397 NFE TRANSFAC yes 118366387
SNP sites on vista3249[chr1:150134154-150134397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 150134167 rs587715680 C G
POLR2A
620174
chr1 150134169 rs587762638 G GT
POLR2A
620175
chr1 150134208 rs182886480 T C
ETS1 HES5 POLR2A
620176
chr1 150134221 rs72694956 G C
IRF8 IRF9 POLR2A STAT1 TCF7L2
620177
chr1 150134225 rs150113111 T G
IRF8 IRF9 POLR2A STAT1 TCF7L2
620178
chr1 150134261 rs587737114 A G
POLR2A ZNF263
620179
chr1 150134282 rs587690091 G C
NFE POLR2A
620180
chr1 150134309 rs118131836 A G
POLR2A
620181
chr1 150134341 rs6685607 G A
POLR2A
620182
chr1 150134382 rs115722287 G A,C
CTCF ESR1 POLR2A SP1
620183
Genes possibly regulated by vista3249[chr1:150134154-150134397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 150039369 150117505 + VPS45 ENSG00000136631.8 150039369 0.67 0.99 1155 5215
chr1 150121373 150136916 + PLEKHO1 ENSG00000023902.9 150121373 0.85 0.99 1156 87219
chr1 150190717 150208504 - ANP32E ENSG00000143401.10 150208504 0.86 0.99 1157 25893
chr1 150229554 150237478 + CA14 ENSG00000118298.6 150229554 0.92 1.0 1158 4843
Expression level of Genes
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miRNAs possibly regulated by vista3249[chr1:150134154-150134397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results