EnhancerDB
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  3. vista32560[chr2:102857184-102857493]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista32560[chr2:102857184-102857493]
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Tissue distribution of vista32560
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Transcription factor that possibly regulate vista32560[chr2:102857184-102857493]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 102857206 102857522 EBF1 UCSC Txn Factor no Conserved 108433426
chr2 102857211 102857602 BHLHE40 UCSC Txn Factor no Conserved 108433427
chr2 102857221 102857894 CTCF UCSC Txn Factor no Conserved 108433428
chr2 102857225 102857729 REST UCSC Txn Factor no Conserved 108433429
chr2 102857281 102857534 FOXA1 UCSC Txn Factor no Conserved 108433430
chr2 102857288 102857596 SMC3 UCSC Txn Factor no Conserved 108433431
chr2 102857308 102857516 FOXA2 UCSC Txn Factor no Conserved 108433432
chr2 102857325 102857574 RAD21 UCSC Txn Factor no Conserved 108433433
chr2 102857215 102857226 HOXA10 JASPAR yes 22104187
chr2 102857216 102857226 ALX3 JASPAR yes 22104188
chr2 102857216 102857226 GSX2 JASPAR yes 22104189
chr2 102857216 102857226 HOXB2 JASPAR yes 22104190
chr2 102857216 102857226 MNX1 JASPAR yes 22104191
chr2 102857217 102857225 LMX1A JASPAR yes 22104192
chr2 102857217 102857225 LMX1B JASPAR yes 22104193
chr2 102857217 102857225 NKX6-1 JASPAR yes 22104194
chr2 102857217 102857225 NKX6-2 JASPAR yes 22104195
chr2 102857217 102857225 VAX1 JASPAR yes 22104196
chr2 102857217 102857225 VAX2 JASPAR yes 22104197
chr2 102857217 102857225 VSX1 JASPAR yes 22104198
chr2 102857217 102857225 VSX2 JASPAR yes 22104199
chr2 102857217 102857227 POU6F2 JASPAR yes 22104200
chr2 102857226 102857237 ELK4 JASPAR yes 22104201
chr2 102857226 102857239 ELF3 JASPAR yes 22104202
chr2 102857227 102857238 ELF5 JASPAR yes 22104203
chr2 102857227 102857239 EHF JASPAR yes 22104204
chr2 102857227 102857239 ELF1 JASPAR yes 22104205
chr2 102857227 102857239 ELF4 JASPAR yes 22104206
chr2 102857227 102857240 ELF1 JASPAR yes 22104207
chr2 102857228 102857235 SPI1 JASPAR yes 22104208
chr2 102857228 102857236 EHF JASPAR yes 22104209
chr2 102857228 102857236 FEV JASPAR yes 22104210
chr2 102857235 102857239 ESR1 TRANSFAC yes 22104211
chr2 102857245 102857251 LEF1 TRANSFAC yes 22104212
chr2 102857245 102857251 SOX10 JASPAR yes 22104213
chr2 102857246 102857261 RUNX2 JASPAR yes 22104214
chr2 102857249 102857260 RUNX1 JASPAR yes 22104215
chr2 102857250 102857260 RUNX3 JASPAR yes 22104216
chr2 102857251 102857260 RUNX2 JASPAR yes 22104217
chr2 102857272 102857277 GATA2 JASPAR yes 22104218
chr2 102857290 102857301 FLI1 JASPAR yes 22104219
chr2 102857292 102857300 FEV JASPAR yes 22104220
chr2 102857309 102857324 JUND JASPAR yes 22104221
chr2 102857311 102857325 BATF3 JASPAR yes 22104222
chr2 102857312 102857324 JDP2 JASPAR yes 22104223
chr2 102857314 102857321 JUN TRANSFAC yes 22104224
chr2 102857320 102857341 IRF1 JASPAR yes 22104225
chr2 102857321 102857336 FOXP1 JASPAR yes 22104226
chr2 102857322 102857329 SPIB JASPAR yes 22104227
chr2 102857324 102857338 STAT1 JASPAR yes 22104228
chr2 102857324 102857339 PRDM1 JASPAR yes 22104229
chr2 102857324 102857339 STAT2 JASPAR yes 22104230
chr2 102857373 102857377 YY1 TRANSFAC yes 22104231
chr2 102857373 102857383 ETV6 JASPAR yes 22104232
chr2 102857373 102857386 ELF1 JASPAR yes 22104233
chr2 102857374 102857382 FEV JASPAR yes 22104234
chr2 102857376 102857383 SPIB JASPAR yes 22104235
chr2 102857380 102857391 EBF1 JASPAR yes 22104236
chr2 102857392 102857403 FOXA1 JASPAR yes 22104237
chr2 102857399 102857409 RORA JASPAR yes 22104238
chr2 102857400 102857411 ESRRA JASPAR yes 22104239
chr2 102857400 102857411 ESRRB JASPAR yes 22104240
chr2 102857402 102857410 NR4A2 JASPAR yes 22104241
chr2 102857404 102857408 ESR1 TRANSFAC yes 22104242
chr2 102857404 102857421 PAX1 JASPAR yes 22104243
chr2 102857404 102857421 PAX9 JASPAR yes 22104244
chr2 102857405 102857419 PAX6 JASPAR yes 22104245
chr2 102857417 102857428 FOXA1 JASPAR yes 22104246
chr2 102857417 102857432 FOXA1 JASPAR yes 22104247
chr2 102857442 102857453 TFAP2A JASPAR yes 22104248
chr2 102857442 102857453 TFAP2B JASPAR yes 22104249
chr2 102857442 102857453 TFAP2C JASPAR yes 22104250
chr2 102857446 102857458 E2F1 JASPAR yes 22104251
chr2 102857456 102857475 CTCF JASPAR yes 22104252
chr2 102857486 102857490 NFE TRANSFAC yes 22104253
SNP sites on vista32560[chr2:102857184-102857493]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 102857202 rs547728007 A G no 5925611
chr2 102857219 rs111558264 T C
ALX3 BHLHE40 EBF1 GSX2 HOXA10 HOXB2 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 POU6F2 VAX1 VAX2 VSX1 VSX2
5925612
chr2 102857413 rs113830150 C T
BHLHE40 CTCF EBF1 FOXA1 FOXA2 PAX1 PAX6 PAX9 RAD21 REST SMC3
5925613
Genes possibly regulated by vista32560[chr2:102857184-102857493]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 102803433 102856462 + IL1RL2 ENSG00000115598.5 102803433 0.86 0.9 2638 46249
chr2 102927962 102968497 + IL1RL1 ENSG00000115602.12 102927962 0.97 0.9 2639 29531
chr2 102927989 103015218 + IL18R1 ENSG00000115604.6 102927989 0.9 0.99 2640 29504
Expression level of Genes
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miRNAs possibly regulated by vista32560[chr2:102857184-102857493]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results