EnhancerDB
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  3. vista326[chr1:10556105-10556527]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista326[chr1:10556105-10556527]
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Tissue distribution of vista326
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Transcription factor that possibly regulate vista326[chr1:10556105-10556527]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10556108 10556114 NFIC JASPAR yes 26717196
chr1 10556108 10556114 NFIC JASPAR yes 118228522
chr1 10556116 10556122 LEF1 TRANSFAC yes 26717197
chr1 10556116 10556122 SOX10 JASPAR yes 26717198
chr1 10556116 10556122 LEF1 TRANSFAC yes 118228523
chr1 10556116 10556122 SOX10 JASPAR yes 118228524
chr1 10556128 10556143 RUNX2 JASPAR yes 26717199
chr1 10556128 10556143 RUNX2 JASPAR yes 118228525
chr1 10556132 10556142 RUNX3 JASPAR yes 26717200
chr1 10556132 10556142 RUNX3 JASPAR yes 118228526
chr1 10556133 10556142 RUNX2 JASPAR yes 26717201
chr1 10556133 10556142 RUNX2 JASPAR yes 118228527
chr1 10556140 10556150 FIGLA JASPAR yes 26717202
chr1 10556140 10556150 FIGLA JASPAR yes 118228528
chr1 10556142 10556147 USF2 TRANSFAC yes 26717203
chr1 10556142 10556147 USF2 TRANSFAC yes 118228529
chr1 10556143 10556149 PTF TRANSFAC yes 26717204
chr1 10556143 10556149 PTF TRANSFAC yes 118228530
chr1 10556172 10556183 E2F1 JASPAR yes 26717205
chr1 10556172 10556183 E2F1 JASPAR yes 118228531
chr1 10556173 10556184 E2F4 JASPAR yes 26717206
chr1 10556173 10556184 E2F6 JASPAR yes 26717207
chr1 10556173 10556184 E2F4 JASPAR yes 118228532
chr1 10556173 10556184 E2F6 JASPAR yes 118228533
chr1 10556183 10556197 BATF3 JASPAR yes 26717208
chr1 10556183 10556197 BATF3 JASPAR yes 118228534
chr1 10556185 10556195 SREBF1 JASPAR yes 26717209
chr1 10556185 10556195 SREBF1 JASPAR yes 118228535
chr1 10556186 10556191 ATF1 TRANSFAC yes 26717210
chr1 10556186 10556191 ATF1 TRANSFAC yes 118228536
chr1 10556200 10556220 TP63 JASPAR yes 26717211
chr1 10556200 10556220 TP63 JASPAR yes 118228537
chr1 10556201 10556219 TP73 JASPAR yes 26717212
chr1 10556201 10556219 TP73 JASPAR yes 118228538
chr1 10556248 10556260 TFAP2A JASPAR yes 26717213
chr1 10556248 10556260 TFAP2A JASPAR yes 118228539
chr1 10556269 10556274 MYC TRANSFAC yes 26717214
chr1 10556269 10556274 MYC TRANSFAC yes 118228540
chr1 10556277 10556281 NFE TRANSFAC yes 26717215
chr1 10556277 10556281 NFE TRANSFAC yes 118228541
chr1 10556296 10556307 DMRT3 JASPAR yes 26717216
chr1 10556296 10556307 DMRT3 JASPAR yes 118228542
chr1 10556348 10556355 USF2 TRANSFAC yes 26717217
chr1 10556348 10556355 USF2 TRANSFAC yes 118228543
chr1 10556350 10556355 USF2 TRANSFAC yes 26717218
chr1 10556350 10556355 USF2 TRANSFAC yes 118228544
chr1 10556356 10556367 NFIL3 JASPAR yes 26717219
chr1 10556356 10556367 NFIL3 JASPAR yes 118228545
chr1 10556356 10556370 ATF7 JASPAR yes 26717220
chr1 10556356 10556370 BATF3 JASPAR yes 26717221
chr1 10556356 10556370 CREB3 JASPAR yes 26717222
chr1 10556356 10556370 ATF7 JASPAR yes 118228546
chr1 10556356 10556370 BATF3 JASPAR yes 118228547
chr1 10556356 10556370 CREB3 JASPAR yes 118228548
chr1 10556357 10556369 DBP JASPAR yes 26717223
chr1 10556357 10556369 HLF JASPAR yes 26717224
chr1 10556357 10556369 JDP2 JASPAR yes 26717225
chr1 10556357 10556369 TEF JASPAR yes 26717226
chr1 10556357 10556369 DBP JASPAR yes 118228549
chr1 10556357 10556369 HLF JASPAR yes 118228550
chr1 10556357 10556369 JDP2 JASPAR yes 118228551
chr1 10556357 10556369 TEF JASPAR yes 118228552
chr1 10556357 10556370 ATF4 JASPAR yes 26717227
chr1 10556357 10556370 ATF4 JASPAR yes 118228553
chr1 10556357 10556372 JUND JASPAR yes 26717228
chr1 10556357 10556372 JUND JASPAR yes 118228554
chr1 10556358 10556371 JUN JASPAR yes 26717229
chr1 10556358 10556371 JUN JASPAR yes 118228555
chr1 10556359 10556366 JUN TRANSFAC yes 26717230
chr1 10556359 10556366 JUN TRANSFAC yes 118228556
chr1 10556359 10556367 CREB1 JASPAR yes 26717231
chr1 10556359 10556367 GMEB2 JASPAR yes 26717232
chr1 10556359 10556367 CREB1 JASPAR yes 118228557
chr1 10556359 10556367 GMEB2 JASPAR yes 118228558
chr1 10556361 10556366 ATF1 TRANSFAC yes 26717233
chr1 10556361 10556366 ATF1 TRANSFAC yes 118228559
chr1 10556382 10556387 GATA2 JASPAR yes 26717234
chr1 10556382 10556387 GATA2 JASPAR yes 118228560
chr1 10556405 10556420 PRDM1 JASPAR yes 26717235
chr1 10556405 10556420 PRDM1 JASPAR yes 118228561
chr1 10556433 10556438 ETS2 TRANSFAC yes 26717236
chr1 10556433 10556438 ETS2 TRANSFAC yes 118228562
chr1 10556435 10556443 EHF JASPAR yes 26717237
chr1 10556435 10556443 EHF JASPAR yes 118228563
chr1 10556437 10556442 ETS2 TRANSFAC yes 26717238
chr1 10556437 10556442 ETS2 TRANSFAC yes 118228564
chr1 10556442 10556450 CREB1 JASPAR yes 26717239
chr1 10556442 10556450 CREB1 JASPAR yes 118228565
chr1 10556444 10556461 RXRA JASPAR yes 26717240
chr1 10556444 10556461 RXRA JASPAR yes 118228566
chr1 10556445 10556449 ESR1 TRANSFAC yes 26717241
chr1 10556445 10556449 ESR1 TRANSFAC yes 118228567
chr1 10556450 10556464 E2F7 JASPAR yes 26717242
chr1 10556450 10556464 E2F7 JASPAR yes 118228568
chr1 10556454 10556459 SP1 TRANSFAC yes 26717243
chr1 10556454 10556459 SP1 TRANSFAC yes 118228569
chr1 10556456 10556467 NFKB1 JASPAR yes 26717244
chr1 10556456 10556467 NFKB1 JASPAR yes 118228570
chr1 10556457 10556468 NFKB1 JASPAR yes 26717245
chr1 10556457 10556468 NFKB1 JASPAR yes 118228571
chr1 10556458 10556468 RELA JASPAR yes 26717246
chr1 10556458 10556468 REL JASPAR yes 26717247
chr1 10556458 10556468 RELA JASPAR yes 118228572
chr1 10556458 10556468 REL JASPAR yes 118228573
chr1 10556463 10556474 EBF1 JASPAR yes 26717248
chr1 10556463 10556474 EBF1 JASPAR yes 118228574
chr1 10556472 10556491 PAX5 JASPAR yes 26717249
chr1 10556472 10556491 PAX5 JASPAR yes 118228575
chr1 10556506 10556521 TFAP2A JASPAR yes 26717250
chr1 10556506 10556521 TFAP2A JASPAR yes 118228576
chr1 10556507 10556521 EBF1 JASPAR yes 26717251
chr1 10556507 10556521 EBF1 JASPAR yes 118228577
chr1 10556508 10556523 TFAP2A JASPAR yes 26717252
chr1 10556508 10556523 TFAP2C JASPAR yes 26717253
chr1 10556508 10556523 TFAP2A JASPAR yes 118228578
chr1 10556508 10556523 TFAP2C JASPAR yes 118228579
chr1 10556509 10556520 EBF1 JASPAR yes 26717254
chr1 10556509 10556520 EBF1 JASPAR yes 118228580
chr1 10556510 10556519 TFAP2A JASPAR yes 26717255
chr1 10556510 10556519 TFAP2A JASPAR yes 118228581
chr1 10556514 10556519 SP1 TRANSFAC yes 26717256
chr1 10556514 10556519 SP1 TRANSFAC yes 118228582
chr1 10556515 10556532 PAX9 JASPAR yes 26717257
chr1 10556515 10556532 PAX9 JASPAR yes 118228583
chr1 10556516 10556535 PAX5 JASPAR yes 26717258
chr1 10556516 10556535 PAX5 JASPAR yes 118228584
SNP sites on vista326[chr1:10556105-10556527]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10556178 rs2480788 G A
E2F1 E2F4 E2F6
72195
chr1 10556189 rs144659740 A C
ATF1 BATF3 SREBF1
72196
chr1 10556376 rs138611692 G A no 72197
chr1 10556386 rs10127643 C T
GATA2
72198
chr1 10556447 rs648324 G T
CREB1 ESR1 RXRA
72199
chr1 10556485 rs648399 T C
PAX5
72200
Genes possibly regulated by vista326[chr1:10556105-10556527]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10458649 10480201 + PGD ENSG00000142657.16 10458649 0.73 0.99 135 2544
chr1 10490159 10512210 + APITD1 ENSG00000175279.17 10490159 0.77 0.94 136 34054
chr1 10490159 10512210 + APITD1-CORT ENSG00000251503.3 10490159 0.86 0.88 137 34054
chr1 10509776 10511959 + CORT ENSG00000241563.2 10509776 0.82 0.99 138 53671
chr1 10516579 10532583 - DFFA ENSG00000160049.7 10532583 0.75 1.0 139 76478
chr1 10532345 10690815 + PEX14 ENSG00000142655.8 10532345 0.57 1.0 140 76240
Expression level of Genes
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miRNAs possibly regulated by vista326[chr1:10556105-10556527]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results