EnhancerDB
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  3. vista3270[chr1:151172142-151172526]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3270[chr1:151172142-151172526]
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Tissue distribution of vista3270
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Transcription factor that possibly regulate vista3270[chr1:151172142-151172526]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 151172162 151172183 ZNF263 JASPAR yes 118367679
chr1 151172192 151172205 SMAD2 JASPAR yes 118367680
chr1 151172200 151172209 SNAI2 JASPAR yes 118367681
chr1 151172200 151172210 ID4 JASPAR yes 118367682
chr1 151172215 151172226 FOXH1 JASPAR yes 118367683
chr1 151172227 151172237 ALX3 JASPAR yes 118367684
chr1 151172227 151172237 EN2 JASPAR yes 118367685
chr1 151172227 151172237 ESX1 JASPAR yes 118367686
chr1 151172227 151172237 GBX1 JASPAR yes 118367687
chr1 151172227 151172237 GBX2 JASPAR yes 118367688
chr1 151172227 151172237 HESX1 JASPAR yes 118367689
chr1 151172227 151172237 LBX2 JASPAR yes 118367690
chr1 151172227 151172237 MIXL1 JASPAR yes 118367691
chr1 151172227 151172237 RAX JASPAR yes 118367692
chr1 151172228 151172236 BARX1 JASPAR yes 118367693
chr1 151172228 151172236 BSX JASPAR yes 118367694
chr1 151172228 151172236 EN1 JASPAR yes 118367695
chr1 151172228 151172236 ISX JASPAR yes 118367696
chr1 151172228 151172236 LHX9 JASPAR yes 118367697
chr1 151172228 151172236 MSX1 JASPAR yes 118367698
chr1 151172228 151172236 MSX2 JASPAR yes 118367699
chr1 151172228 151172236 PRRX1 JASPAR yes 118367700
chr1 151172228 151172236 RAX2 JASPAR yes 118367701
chr1 151172228 151172236 SHOX JASPAR yes 118367702
chr1 151172229 151172240 PHOX2A JASPAR yes 118367703
chr1 151172290 151172305 STAT2 JASPAR yes 118367704
chr1 151172291 151172305 STAT1 JASPAR yes 118367705
chr1 151172292 151172304 IRF1 JASPAR yes 118367706
chr1 151172292 151172306 IRF7 JASPAR yes 118367707
chr1 151172292 151172306 IRF8 JASPAR yes 118367708
chr1 151172292 151172307 IRF9 JASPAR yes 118367709
chr1 151172298 151172303 H4TF1 TRANSFAC yes 118367710
chr1 151172322 151172342 RREB1 JASPAR yes 118367711
chr1 151172326 151172332 TCF4 TRANSFAC yes 118367712
chr1 151172331 151172343 GLI2 JASPAR yes 118367713
chr1 151172331 151172343 ZBTB7B JASPAR yes 118367714
chr1 151172331 151172343 ZBTB7C JASPAR yes 118367715
chr1 151172332 151172344 ZBTB7A JASPAR yes 118367716
chr1 151172334 151172339 SP1 TRANSFAC yes 118367717
chr1 151172337 151172342 SP1 TRANSFAC yes 118367718
chr1 151172337 151172348 E2F4 JASPAR yes 118367719
chr1 151172337 151172348 E2F6 JASPAR yes 118367720
chr1 151172338 151172343 SP1 TRANSFAC yes 118367721
chr1 151172351 151172363 YY1 JASPAR yes 118367722
chr1 151172354 151172360 YY1 JASPAR yes 118367723
chr1 151172360 151172381 ZNF263 JASPAR yes 118367724
chr1 151172372 151172386 E2F7 JASPAR yes 118367725
chr1 151172373 151172385 E2F8 JASPAR yes 118367726
chr1 151172375 151172385 MZF1 JASPAR yes 118367727
chr1 151172375 151172390 ZIC3 JASPAR yes 118367728
chr1 151172384 151172398 JUN JASPAR yes 118367729
chr1 151172393 151172414 ZNF263 JASPAR yes 118367730
chr1 151172406 151172416 ZNF740 JASPAR yes 118367731
chr1 151172411 151172426 TFAP2A JASPAR yes 118367732
chr1 151172467 151172472 ETS2 TRANSFAC yes 118367733
chr1 151172494 151172510 SRF JASPAR yes 118367734
chr1 151172505 151172510 ETS2 TRANSFAC yes 118367735
chr1 151172508 151172513 ETS2 TRANSFAC yes 118367736
chr1 151172512 151172522 NFATC3 JASPAR yes 118367737
SNP sites on vista3270[chr1:151172142-151172526]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 151172229 rs117490723 C T
ALX3 BARX1 BSX EN1 EN2 ESX1 GBX1 GBX2 HESX1 ISX LBX2 LHX9 MIXL1 MSX1 MSX2 PHOX2A PRRX1 RAX RAX2 SHOX
624283
chr1 151172410 rs74127549 C T
ZNF263 ZNF740
624284
chr1 151172435 rs183816164 A T no 624285
chr1 151172447 rs78868477 A G no 624286
Genes possibly regulated by vista3270[chr1:151172142-151172526]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 151104161 151119104 - SEMA6C ENSG00000143434.11 151119104 0.8 1.0 1187 46962
chr1 151129105 151132225 + TNFAIP8L2 ENSG00000163154.5 151129105 0.94 0.95 1188 56963
chr1 151129140 151142773 + SCNM1 ENSG00000163156.7 151129140 0.76 0.99 1189 56998
chr1 151132224 151138424 - LYSMD1 ENSG00000163155.7 151138424 0.72 0.99 1190 66282
chr1 151142462 151148760 - TMOD4 ENSG00000163157.10 151148760 0.74 0.84 1191 76618
chr1 151142463 151167797 - VPS72 ENSG00000163159.7 151167797 0.57 0.99 1192 95655
chr1 151170425 151222012 + PIP5K1A ENSG00000143398.15 151170425 0.7 1.0 1193 98283
chr1 151227179 151239955 + PSMD4 ENSG00000159352.11 151227179 0.53 1.0 1194 45347
chr1 151252500 151254405 - RP11-126K1.2 ENSG00000232671.2 151254405 0.88 1.0 1195 18121
chr1 151254094 151264656 + ZNF687 ENSG00000143373.13 151254094 0.64 1.0 1196 18432
Expression level of Genes
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miRNAs possibly regulated by vista3270[chr1:151172142-151172526]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results