EnhancerDB
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  3. vista3280[chr1:151445792-151446161]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3280[chr1:151445792-151446161]
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Tissue distribution of vista3280
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Transcription factor that possibly regulate vista3280[chr1:151445792-151446161]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 151445943 151446147 SRF UCSC Txn Factor no Conserved 107829408
chr1 151445784 151445798 CREB3L1 JASPAR yes 32179797
chr1 151445784 151445798 CREB3L1 JASPAR yes 118368214
chr1 151445787 151445799 HINFP JASPAR yes 32179798
chr1 151445787 151445799 HINFP JASPAR yes 118368215
chr1 151445792 151445798 MZF1 JASPAR yes 32179799
chr1 151445792 151445798 MZF1 JASPAR yes 118368216
chr1 151445817 151445820 MYB TRANSFAC yes 32179800
chr1 151445817 151445820 MYB TRANSFAC yes 118368217
chr1 151445821 151445832 E2F6 JASPAR yes 32179801
chr1 151445821 151445832 E2F6 JASPAR yes 118368218
chr1 151445821 151445835 E2F7 JASPAR yes 32179802
chr1 151445821 151445835 E2F7 JASPAR yes 118368219
chr1 151445841 151445852 DMRT3 JASPAR yes 32179803
chr1 151445841 151445852 DMRT3 JASPAR yes 118368220
chr1 151445848 151445852 YY1 TRANSFAC yes 32179804
chr1 151445848 151445852 YY1 TRANSFAC yes 118368221
chr1 151445871 151445881 SMAD3 JASPAR yes 32179805
chr1 151445871 151445881 SMAD3 JASPAR yes 118368222
chr1 151445871 151445886 HSF1 JASPAR yes 32179806
chr1 151445871 151445886 HSF1 JASPAR yes 118368223
chr1 151445872 151445885 HSF2 JASPAR yes 32179807
chr1 151445872 151445885 HSF2 JASPAR yes 118368224
chr1 151445882 151445898 GLIS1 JASPAR yes 32179808
chr1 151445882 151445898 GLIS1 JASPAR yes 118368225
chr1 151445885 151445895 ZNF740 JASPAR yes 32179809
chr1 151445885 151445895 ZNF740 JASPAR yes 118368226
chr1 151445911 151445921 GCM2 JASPAR yes 32179810
chr1 151445911 151445921 GCM2 JASPAR yes 118368227
chr1 151445911 151445922 GCM1 JASPAR yes 32179811
chr1 151445911 151445922 GCM1 JASPAR yes 118368228
chr1 151445917 151445922 SP1 TRANSFAC yes 32179812
chr1 151445917 151445922 SP1 TRANSFAC yes 118368229
chr1 151445921 151445926 SP1 TRANSFAC yes 32179813
chr1 151445921 151445926 SP1 TRANSFAC yes 118368230
chr1 151445933 151445939 MAZ TRANSFAC yes 32179814
chr1 151445933 151445939 MAZ TRANSFAC yes 118368231
chr1 151445964 151445969 SP1 TRANSFAC yes 32179815
chr1 151445964 151445969 SP1 TRANSFAC yes 118368232
chr1 151445967 151445976 TFAP2A JASPAR yes 32179816
chr1 151445967 151445976 TFAP2A JASPAR yes 118368233
chr1 151445990 151445999 TFAP2A JASPAR yes 32179817
chr1 151445990 151445999 TFAP2A JASPAR yes 118368234
chr1 151445995 151446006 E2F1 JASPAR yes 32179818
chr1 151445995 151446006 E2F1 JASPAR yes 118368235
chr1 151445995 151446014 CTCF JASPAR yes 32179819
chr1 151445995 151446014 CTCF JASPAR yes 118368236
chr1 151445996 151446001 SP1 TRANSFAC yes 32179820
chr1 151445996 151446001 SP1 TRANSFAC yes 118368237
chr1 151446013 151446018 ETS2 TRANSFAC yes 32179821
chr1 151446013 151446018 ETS2 TRANSFAC yes 118368238
chr1 151446014 151446024 SP1 JASPAR yes 32179822
chr1 151446014 151446024 SP1 JASPAR yes 118368239
chr1 151446035 151446053 SRF JASPAR yes 32179823
chr1 151446035 151446053 SRF JASPAR yes 118368240
chr1 151446037 151446056 CTCF JASPAR yes 32179824
chr1 151446037 151446056 CTCF JASPAR yes 118368241
chr1 151446048 151446052 LFA1 TRANSFAC yes 32179825
chr1 151446048 151446052 LFA1 TRANSFAC yes 118368242
chr1 151446057 151446062 SP1 TRANSFAC yes 32179826
chr1 151446057 151446062 SP1 TRANSFAC yes 118368243
chr1 151446074 151446085 E2F1 JASPAR yes 32179827
chr1 151446074 151446085 E2F1 JASPAR yes 118368244
chr1 151446091 151446097 MAZ TRANSFAC yes 32179828
chr1 151446091 151446097 MAZ TRANSFAC yes 118368245
chr1 151446091 151446102 E2F6 JASPAR yes 32179829
chr1 151446091 151446102 E2F6 JASPAR yes 118368246
chr1 151446116 151446121 SP1 TRANSFAC yes 32179830
chr1 151446116 151446121 SP1 TRANSFAC yes 118368247
chr1 151446138 151446147 NKX2-8 JASPAR yes 32179831
chr1 151446138 151446147 NKX2-8 JASPAR yes 118368248
SNP sites on vista3280[chr1:151445792-151446161]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 151445816 rs576732038 G A no 625323
chr1 151445828 rs539053355 C T
E2F6 E2F7
625324
chr1 151445888 rs112139676 G A,C,T
GLIS1 ZNF740
625325
chr1 151445895 rs12756408 G T
GLIS1 ZNF740
625326
chr1 151445895 rs529955399 GA G
GLIS1 ZNF740
625327
chr1 151445896 rs374454992 A G
GLIS1
625328
chr1 151445917 rs574855522 G A,T
GCM1 GCM2 SP1
625329
chr1 151445953 rs115423375 C T
SRF
625330
chr1 151446021 rs75084300 G C
SP1 SRF
625331
chr1 151446142 rs568610801 G C
NKX2-8 SRF
625332
Genes possibly regulated by vista3280[chr1:151445792-151446161]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 151372010 151374420 + PSMB4 ENSG00000159377.6 151372010 0.49 0.99 1200 26218
chr1 151375200 151431941 - POGZ ENSG00000143442.17 151431941 0.75 1.0 1201 86149
chr1 151482986 151511168 + CGN ENSG00000143375.10 151482986 0.83 1.0 1202 63175
chr1 151512781 151556059 + TUFT1 ENSG00000143367.11 151512781 0.87 1.0 1203 33380
Expression level of Genes
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miRNAs possibly regulated by vista3280[chr1:151445792-151446161]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results