EnhancerDB
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  3. vista329[chr1:10559059-10559458]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista329[chr1:10559059-10559458]
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Tissue distribution of vista329
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Transcription factor that possibly regulate vista329[chr1:10559059-10559458]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10559055 10559059 NFE TRANSFAC yes 26717627
chr1 10559055 10559059 NFE TRANSFAC yes 118228681
chr1 10559087 10559091 TEAD2 TRANSFAC yes 26717628
chr1 10559087 10559091 TEAD2 TRANSFAC yes 118228682
chr1 10559089 10559096 NKX3-1 JASPAR yes 26717629
chr1 10559089 10559096 NKX3-1 JASPAR yes 118228683
chr1 10559093 10559097 YY1 TRANSFAC yes 26717630
chr1 10559093 10559097 YY1 TRANSFAC yes 118228684
chr1 10559104 10559109 SP1 TRANSFAC yes 26717631
chr1 10559104 10559109 SP1 TRANSFAC yes 118228685
chr1 10559109 10559119 MYF6 JASPAR yes 26717632
chr1 10559109 10559119 MYF6 JASPAR yes 118228686
chr1 10559115 10559128 ZBTB18 JASPAR yes 26717633
chr1 10559115 10559128 ZBTB18 JASPAR yes 118228687
chr1 10559118 10559131 ZBTB18 JASPAR yes 26717634
chr1 10559118 10559131 ZBTB18 JASPAR yes 118228688
chr1 10559120 10559130 MAX JASPAR yes 26717635
chr1 10559120 10559130 MAX JASPAR yes 118228689
chr1 10559125 10559137 INSM1 JASPAR yes 26717636
chr1 10559125 10559137 INSM1 JASPAR yes 118228690
chr1 10559148 10559160 FOXI1 JASPAR yes 26717637
chr1 10559148 10559160 FOXI1 JASPAR yes 118228691
chr1 10559154 10559169 IRF9 JASPAR yes 26717638
chr1 10559154 10559169 IRF9 JASPAR yes 118228692
chr1 10559155 10559169 IRF8 JASPAR yes 26717639
chr1 10559155 10559169 IRF8 JASPAR yes 118228693
chr1 10559156 10559161 GATA2 JASPAR yes 26717640
chr1 10559156 10559161 GATA2 JASPAR yes 118228694
chr1 10559156 10559170 STAT1 JASPAR yes 26717641
chr1 10559156 10559170 STAT1 JASPAR yes 118228695
chr1 10559156 10559171 STAT2 JASPAR yes 26717642
chr1 10559156 10559171 STAT2 JASPAR yes 118228696
chr1 10559156 10559174 IRF2 JASPAR yes 26717643
chr1 10559156 10559174 IRF2 JASPAR yes 118228697
chr1 10559157 10559169 IRF1 JASPAR yes 26717644
chr1 10559157 10559169 IRF1 JASPAR yes 118228698
chr1 10559175 10559193 RARA JASPAR yes 26717645
chr1 10559175 10559193 RARA JASPAR yes 118228699
chr1 10559195 10559199 YY1 TRANSFAC yes 26717646
chr1 10559195 10559199 YY1 TRANSFAC yes 118228700
chr1 10559198 10559209 BATF JASPAR yes 26717647
chr1 10559198 10559209 BATF JASPAR yes 118228701
chr1 10559200 10559211 USF1 JASPAR yes 26717648
chr1 10559200 10559211 USF1 JASPAR yes 118228702
chr1 10559201 10559211 TFEB JASPAR yes 26717649
chr1 10559201 10559211 TFEC JASPAR yes 26717650
chr1 10559201 10559211 TFEB JASPAR yes 118228703
chr1 10559201 10559211 TFEC JASPAR yes 118228704
chr1 10559209 10559220 RUNX1 JASPAR yes 26717651
chr1 10559209 10559220 RUNX1 JASPAR yes 118228705
chr1 10559218 10559222 YY1 TRANSFAC yes 26717652
chr1 10559218 10559222 YY1 TRANSFAC yes 118228706
chr1 10559251 10559264 ZBTB18 JASPAR yes 26717653
chr1 10559251 10559264 ZBTB18 JASPAR yes 118228707
chr1 10559325 10559339 ONECUT2 JASPAR yes 26717654
chr1 10559325 10559339 ONECUT3 JASPAR yes 26717655
chr1 10559325 10559339 ONECUT2 JASPAR yes 118228708
chr1 10559325 10559339 ONECUT3 JASPAR yes 118228709
chr1 10559361 10559376 NR2C2 JASPAR yes 26717656
chr1 10559361 10559376 NR2C2 JASPAR yes 118228710
chr1 10559366 10559377 TBX2 JASPAR yes 26717657
chr1 10559366 10559377 TBX2 JASPAR yes 118228711
chr1 10559384 10559393 VENTX JASPAR yes 26717658
chr1 10559384 10559393 VENTX JASPAR yes 118228712
chr1 10559390 10559401 NFE2 JASPAR yes 26717659
chr1 10559390 10559401 NFE2 JASPAR yes 118228713
chr1 10559402 10559408 YY1 JASPAR yes 26717660
chr1 10559402 10559408 YY1 JASPAR yes 118228714
chr1 10559410 10559420 GABPA JASPAR yes 26717661
chr1 10559410 10559420 GABPA JASPAR yes 118228715
chr1 10559410 10559428 IRF2 JASPAR yes 26717662
chr1 10559410 10559428 IRF2 JASPAR yes 118228716
chr1 10559413 10559418 ETS2 TRANSFAC yes 26717663
chr1 10559413 10559418 ETS2 TRANSFAC yes 118228717
chr1 10559419 10559422 MYB TRANSFAC yes 26717664
chr1 10559419 10559422 MYB TRANSFAC yes 118228718
chr1 10559433 10559454 IRF1 JASPAR yes 26717665
chr1 10559433 10559454 IRF1 JASPAR yes 118228719
chr1 10559434 10559455 IRF1 JASPAR yes 26717666
chr1 10559434 10559455 IRF1 JASPAR yes 118228720
chr1 10559440 10559446 TCF4 TRANSFAC yes 26717667
chr1 10559440 10559446 TCF4 TRANSFAC yes 118228721
chr1 10559440 10559455 FOXP1 JASPAR yes 26717668
chr1 10559440 10559455 FOXP1 JASPAR yes 118228722
chr1 10559440 10559461 IRF1 JASPAR yes 26717669
chr1 10559440 10559461 IRF1 JASPAR yes 118228723
chr1 10559441 10559452 FOXP2 JASPAR yes 26717670
chr1 10559441 10559452 FOXP2 JASPAR yes 118228724
chr1 10559442 10559457 FOXP1 JASPAR yes 26717671
chr1 10559442 10559457 FOXP1 JASPAR yes 118228725
chr1 10559446 10559467 ZNF263 JASPAR yes 26717672
chr1 10559446 10559467 ZNF263 JASPAR yes 118228726
chr1 10559455 10559459 NFE TRANSFAC yes 26717673
chr1 10559455 10559459 NFE TRANSFAC yes 118228727
SNP sites on vista329[chr1:10559059-10559458]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10559083 rs377309992 TG T no 72233
chr1 10559135 rs74051823 T C
INSM1
72234
chr1 10559287 rs78397159 A C,G no 72235
chr1 10559323 rs193104859 G C no 72236
chr1 10559416 rs541220409 C T
ETS2 GABPA IRF2
72237
chr1 10559445 rs533858141 G GT
FOXP1 FOXP2 IRF1 TCF4
72238
Genes possibly regulated by vista329[chr1:10559059-10559458]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10490159 10512210 + APITD1 ENSG00000175279.17 10490159 0.77 0.94 136 31100
chr1 10490159 10512210 + APITD1-CORT ENSG00000251503.3 10490159 0.86 0.88 137 31100
chr1 10509776 10511959 + CORT ENSG00000241563.2 10509776 0.82 0.99 138 50717
chr1 10516579 10532583 - DFFA ENSG00000160049.7 10532583 0.75 1.0 139 73524
chr1 10532345 10690815 + PEX14 ENSG00000142655.8 10532345 0.57 1.0 140 73286
Expression level of Genes
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miRNAs possibly regulated by vista329[chr1:10559059-10559458]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results