EnhancerDB
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  3. vista32909[chr2:120041416-120041980]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista32909[chr2:120041416-120041980]
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Tissue distribution of vista32909
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Transcription factor that possibly regulate vista32909[chr2:120041416-120041980]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 120041407 120041420 DUXA JASPAR yes 22121365
chr2 120041407 120041420 DUXA JASPAR yes 76475679
chr2 120041408 120041419 PHOX2A JASPAR yes 22121366
chr2 120041408 120041419 PROP1 JASPAR yes 22121367
chr2 120041408 120041419 PHOX2A JASPAR yes 76475680
chr2 120041408 120041419 PROP1 JASPAR yes 76475681
chr2 120041409 120041429 RREB1 JASPAR yes 22121368
chr2 120041409 120041429 RREB1 JASPAR yes 76475682
chr2 120041410 120041424 ONECUT3 JASPAR yes 22121369
chr2 120041410 120041424 ONECUT3 JASPAR yes 76475683
chr2 120041460 120041474 STAT1 JASPAR yes 22121370
chr2 120041460 120041474 STAT1 JASPAR yes 76475684
chr2 120041465 120041476 NFKB1 JASPAR yes 22121371
chr2 120041465 120041476 NFKB1 JASPAR yes 76475685
chr2 120041466 120041476 RELA JASPAR yes 22121372
chr2 120041466 120041476 REL JASPAR yes 22121373
chr2 120041466 120041476 RELA JASPAR yes 76475686
chr2 120041466 120041476 REL JASPAR yes 76475687
chr2 120041490 120041496 ETS1 JASPAR yes 22121374
chr2 120041490 120041496 ETS1 JASPAR yes 76475688
chr2 120041526 120041539 ATF4 JASPAR yes 22121375
chr2 120041526 120041539 ATF4 JASPAR yes 76475689
chr2 120041528 120041539 CEBPB JASPAR yes 22121376
chr2 120041528 120041539 CEBPB JASPAR yes 76475690
chr2 120041545 120041555 ETV3 JASPAR yes 22121377
chr2 120041545 120041555 ETV5 JASPAR yes 22121378
chr2 120041545 120041555 ETV3 JASPAR yes 76475691
chr2 120041545 120041555 ETV5 JASPAR yes 76475692
chr2 120041545 120041556 SPDEF JASPAR yes 22121379
chr2 120041545 120041556 SPDEF JASPAR yes 76475693
chr2 120041545 120041557 ELF1 JASPAR yes 22121380
chr2 120041545 120041557 ELF4 JASPAR yes 22121381
chr2 120041545 120041557 ELF1 JASPAR yes 76475694
chr2 120041545 120041557 ELF4 JASPAR yes 76475695
chr2 120041546 120041555 ELK4 JASPAR yes 22121382
chr2 120041546 120041555 ELK4 JASPAR yes 76475696
chr2 120041563 120041575 PROX1 JASPAR yes 22121383
chr2 120041563 120041575 PROX1 JASPAR yes 76475697
chr2 120041621 120041628 SPIB JASPAR yes 22121384
chr2 120041621 120041628 SPIB JASPAR yes 76475698
chr2 120041681 120041693 NHLH1 JASPAR yes 22121385
chr2 120041681 120041693 NHLH1 JASPAR yes 76475699
chr2 120041682 120041692 NHLH1 JASPAR yes 22121386
chr2 120041682 120041692 NHLH1 JASPAR yes 76475700
chr2 120041717 120041727 NHLH1 JASPAR yes 22121387
chr2 120041717 120041727 NHLH1 JASPAR yes 76475701
chr2 120041747 120041761 IRF8 JASPAR yes 22121388
chr2 120041747 120041761 IRF8 JASPAR yes 76475702
chr2 120041749 120041770 IRF1 JASPAR yes 22121389
chr2 120041749 120041770 IRF1 JASPAR yes 76475703
chr2 120041751 120041766 STAT2 JASPAR yes 22121390
chr2 120041751 120041766 STAT2 JASPAR yes 76475704
chr2 120041752 120041766 STAT1 JASPAR yes 22121391
chr2 120041752 120041766 STAT1 JASPAR yes 76475705
chr2 120041767 120041771 H1TF2 TRANSFAC yes 22121392
chr2 120041767 120041771 NFE TRANSFAC yes 22121393
chr2 120041767 120041771 SRF TRANSFAC yes 22121394
chr2 120041767 120041771 H1TF2 TRANSFAC yes 76475706
chr2 120041767 120041771 NFE TRANSFAC yes 76475707
chr2 120041767 120041771 SRF TRANSFAC yes 76475708
chr2 120041777 120041797 ESR1 JASPAR yes 22121395
chr2 120041777 120041797 ESR1 JASPAR yes 76475709
chr2 120041781 120041799 ESR2 JASPAR yes 22121396
chr2 120041781 120041799 ESR2 JASPAR yes 76475710
chr2 120041787 120041806 PAX5 JASPAR yes 22121397
chr2 120041787 120041806 PAX5 JASPAR yes 76475711
chr2 120041819 120041838 PAX5 JASPAR yes 22121398
chr2 120041819 120041838 PAX5 JASPAR yes 76475712
chr2 120041878 120041882 H1TF2 TRANSFAC yes 22121399
chr2 120041878 120041882 NFE TRANSFAC yes 22121400
chr2 120041878 120041882 SRF TRANSFAC yes 22121401
chr2 120041878 120041882 H1TF2 TRANSFAC yes 76475713
chr2 120041878 120041882 NFE TRANSFAC yes 76475714
chr2 120041878 120041882 SRF TRANSFAC yes 76475715
chr2 120041883 120041901 MAFF JASPAR yes 22121402
chr2 120041883 120041901 MAFF JASPAR yes 76475716
chr2 120041885 120041896 NRL JASPAR yes 22121403
chr2 120041885 120041896 NRL JASPAR yes 76475717
chr2 120041885 120041900 MAFK JASPAR yes 22121404
chr2 120041885 120041900 MAFK JASPAR yes 76475718
chr2 120041885 120041906 MAFG JASPAR yes 22121405
chr2 120041885 120041906 MAFG JASPAR yes 76475719
chr2 120041892 120041908 GLIS1 JASPAR yes 22121406
chr2 120041892 120041908 GLIS1 JASPAR yes 76475720
chr2 120041895 120041910 RUNX2 JASPAR yes 22121407
chr2 120041895 120041910 RUNX2 JASPAR yes 76475721
chr2 120041896 120041906 RUNX3 JASPAR yes 22121408
chr2 120041896 120041906 RUNX3 JASPAR yes 76475722
chr2 120041901 120041907 SOX10 JASPAR yes 22121409
chr2 120041901 120041907 SOX10 JASPAR yes 76475723
chr2 120041912 120041925 POU3F3 JASPAR yes 22121410
chr2 120041912 120041925 POU3F3 JASPAR yes 76475724
chr2 120041930 120041945 MEF2C JASPAR yes 22121411
chr2 120041930 120041945 MEF2C JASPAR yes 76475725
chr2 120041963 120041968 MYC TRANSFAC yes 22121412
chr2 120041963 120041968 MYC TRANSFAC yes 76475726
chr2 120041979 120041988 THAP1 JASPAR yes 22121413
chr2 120041979 120041988 THAP1 JASPAR yes 76475727
SNP sites on vista32909[chr2:120041416-120041980]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 120041553 rs9677849 G A
ELF1 ELF4 ELK4 ETV3 ETV5 SPDEF
5984757
chr2 120041570 rs112917582 G A
PROX1
5984758
chr2 120041778 rs141241912 T C
ESR1
5984759
chr2 120041825 rs549738374 G A,T
PAX5
5984760
chr2 120041851 rs150775378 G A no 5984761
chr2 120041892 rs72840948 C T
GLIS1 MAFF MAFG MAFK NRL
5984762
chr2 120041894 rs545799094 GAC G
GLIS1 MAFF MAFG MAFK NRL
5984763
chr2 120041929 rs140053427 G A no 5984764
chr2 120041967 rs60557571 T C
MYC
5984765
chr2 120041979 rs11123508 T C
THAP1
5984766
Genes possibly regulated by vista32909[chr2:120041416-120041980]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 119981384 120023228 + STEAP3 ENSG00000115107.15 119981384 0.96 1.0 2720 39968
chr2 120059801 120124404 - C2orf76 ENSG00000186132.10 120124404 0.72 0.99 2721 17576
chr2 120124497 120130126 + DBI ENSG00000155368.12 120124497 0.84 0.99 2722 17483
Expression level of Genes
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miRNAs possibly regulated by vista32909[chr2:120041416-120041980]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results