EnhancerDB
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  3. vista3292[chr1:151877533-151877895]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3292[chr1:151877533-151877895]
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Tissue distribution of vista3292
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Transcription factor that possibly regulate vista3292[chr1:151877533-151877895]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 151877535 151877539 YY1 TRANSFAC yes 32201526
chr1 151877535 151877539 YY1 TRANSFAC yes 118368643
chr1 151877537 151877543 TCF4 TRANSFAC yes 32201527
chr1 151877537 151877543 TCF4 TRANSFAC yes 118368644
chr1 151877553 151877560 SPIB JASPAR yes 32201528
chr1 151877553 151877560 SPIB JASPAR yes 118368645
chr1 151877578 151877590 HLF JASPAR yes 32201529
chr1 151877578 151877590 HLF JASPAR yes 118368646
chr1 151877578 151877593 HNF1A JASPAR yes 32201530
chr1 151877578 151877593 HNF1A JASPAR yes 118368647
chr1 151877579 151877591 HNF1B JASPAR yes 32201531
chr1 151877579 151877591 HNF1B JASPAR yes 118368648
chr1 151877579 151877592 HNF1B JASPAR yes 32201532
chr1 151877579 151877592 HNF1B JASPAR yes 118368649
chr1 151877585 151877589 YY1 TRANSFAC yes 32201533
chr1 151877585 151877589 YY1 TRANSFAC yes 118368650
chr1 151877589 151877593 TEAD2 TRANSFAC yes 32201534
chr1 151877589 151877593 TEAD2 TRANSFAC yes 118368651
chr1 151877589 151877594 TBP TRANSFAC yes 32201535
chr1 151877589 151877594 TBP TRANSFAC yes 118368652
chr1 151877591 151877600 NKX3-2 JASPAR yes 32201536
chr1 151877591 151877600 NKX3-2 JASPAR yes 118368653
chr1 151877606 151877621 FOXP1 JASPAR yes 32201537
chr1 151877606 151877621 FOXP1 JASPAR yes 118368654
chr1 151877620 151877634 EBF1 JASPAR yes 32201538
chr1 151877620 151877634 EBF1 JASPAR yes 118368655
chr1 151877621 151877632 EBF1 JASPAR yes 32201539
chr1 151877621 151877632 EBF1 JASPAR yes 118368656
chr1 151877622 151877628 MZF1 JASPAR yes 32201540
chr1 151877622 151877628 MZF1 JASPAR yes 118368657
chr1 151877688 151877694 NFIC JASPAR yes 32201541
chr1 151877688 151877694 NFIC JASPAR yes 118368658
chr1 151877726 151877736 SP1 JASPAR yes 32201542
chr1 151877726 151877736 SP1 JASPAR yes 118368659
chr1 151877748 151877758 GABPA JASPAR yes 32201543
chr1 151877748 151877758 GABPA JASPAR yes 118368660
chr1 151877751 151877758 SPIB JASPAR yes 32201544
chr1 151877751 151877758 SPIB JASPAR yes 118368661
chr1 151877761 151877782 IRF1 JASPAR yes 32201545
chr1 151877761 151877782 IRF1 JASPAR yes 118368662
chr1 151877763 151877784 IRF1 JASPAR yes 32201546
chr1 151877763 151877784 IRF1 JASPAR yes 118368663
chr1 151877765 151877786 ZNF263 JASPAR yes 32201547
chr1 151877765 151877786 ZNF263 JASPAR yes 118368664
chr1 151877773 151877787 SPIC JASPAR yes 32201548
chr1 151877773 151877787 SPIC JASPAR yes 118368665
chr1 151877776 151877781 ETS2 TRANSFAC yes 32201549
chr1 151877776 151877781 ETS2 TRANSFAC yes 118368666
chr1 151877788 151877792 H1TF2 TRANSFAC yes 32201550
chr1 151877788 151877792 NFE TRANSFAC yes 32201551
chr1 151877788 151877792 SRF TRANSFAC yes 32201552
chr1 151877788 151877792 H1TF2 TRANSFAC yes 118368667
chr1 151877788 151877792 NFE TRANSFAC yes 118368668
chr1 151877788 151877792 SRF TRANSFAC yes 118368669
chr1 151877788 151877798 HOXA13 JASPAR yes 32201553
chr1 151877788 151877798 HOXB13 JASPAR yes 32201554
chr1 151877788 151877798 HOXD13 JASPAR yes 32201555
chr1 151877788 151877798 HOXA13 JASPAR yes 118368670
chr1 151877788 151877798 HOXB13 JASPAR yes 118368671
chr1 151877788 151877798 HOXD13 JASPAR yes 118368672
chr1 151877792 151877802 TEAD1 JASPAR yes 32201556
chr1 151877792 151877802 TEAD4 JASPAR yes 32201557
chr1 151877792 151877802 TEAD1 JASPAR yes 118368673
chr1 151877792 151877802 TEAD4 JASPAR yes 118368674
chr1 151877793 151877804 PHOX2A JASPAR yes 32201558
chr1 151877793 151877804 PROP1 JASPAR yes 32201559
chr1 151877793 151877804 PHOX2A JASPAR yes 118368675
chr1 151877793 151877804 PROP1 JASPAR yes 118368676
chr1 151877799 151877803 YY1 TRANSFAC yes 32201560
chr1 151877799 151877803 YY1 TRANSFAC yes 118368677
chr1 151877881 151877896 FOXP1 JASPAR yes 32201561
chr1 151877881 151877896 FOXP1 JASPAR yes 118368678
SNP sites on vista3292[chr1:151877533-151877895]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 151877582 rs3071220 TAC T
HLF HNF1A HNF1B
627665
chr1 151877582 rs67132344 TAC T
HLF HNF1A HNF1B
627666
chr1 151877606 rs73005925 A T
FOXP1
627667
chr1 151877651 rs545302344 AC A no 627668
chr1 151877655 rs11204912 G C no 627669
chr1 151877697 rs73005926 C T no 627670
Genes possibly regulated by vista3292[chr1:151877533-151877895]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 151772740 151778630 - LINGO4 ENSG00000213171.2 151778630 0.92 0.98 1211 1097
chr1 151778547 151804348 - RORC ENSG00000143365.12 151804348 0.92 1.0 1212 26815
chr1 151810295 151813033 - C2CD4D ENSG00000225556.1 151813033 0.77 1.0 1213 35500
chr1 151819739 151826173 - THEM5 ENSG00000196407.7 151826173 0.86 0.99 1214 48640
chr1 151846060 151882284 - THEM4 ENSG00000159445.8 151882284 0.75 0.99 1215 95611
chr1 151955391 151966866 - S100A10 ENSG00000197747.4 151966866 0.9 0.99 1216 11029
Expression level of Genes
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miRNAs possibly regulated by vista3292[chr1:151877533-151877895]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results