EnhancerDB
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  3. vista32939[chr2:121495235-121495636]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista32939[chr2:121495235-121495636]
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Tissue distribution of vista32939
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Transcription factor that possibly regulate vista32939[chr2:121495235-121495636]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 121494638 121495374 E2F1 UCSC Txn Factor no Conserved 108433788
chr2 121495242 121495251 PITX3 JASPAR yes 22122483
chr2 121495242 121495251 PITX3 JASPAR yes 76567501
chr2 121495243 121495251 OTX1 JASPAR yes 22122484
chr2 121495243 121495251 OTX2 JASPAR yes 22122485
chr2 121495243 121495251 RHOXF1 JASPAR yes 22122486
chr2 121495243 121495251 OTX1 JASPAR yes 76567502
chr2 121495243 121495251 OTX2 JASPAR yes 76567503
chr2 121495243 121495251 RHOXF1 JASPAR yes 76567504
chr2 121495260 121495268 GATA3 JASPAR yes 22122487
chr2 121495260 121495268 GATA3 JASPAR yes 76567505
chr2 121495272 121495277 MYC TRANSFAC yes 22122488
chr2 121495272 121495277 MYC TRANSFAC yes 76567506
chr2 121495273 121495284 HOXC11 JASPAR yes 22122489
chr2 121495273 121495284 HOXC12 JASPAR yes 22122490
chr2 121495273 121495284 HOXC11 JASPAR yes 76567507
chr2 121495273 121495284 HOXC12 JASPAR yes 76567508
chr2 121495274 121495284 HOXD11 JASPAR yes 22122491
chr2 121495274 121495284 HOXD11 JASPAR yes 76567509
chr2 121495282 121495298 NFYA JASPAR yes 22122492
chr2 121495282 121495298 NFYA JASPAR yes 76567510
chr2 121495294 121495305 FOXA1 JASPAR yes 22122493
chr2 121495294 121495305 FOXA1 JASPAR yes 76567511
chr2 121495305 121495319 PLAG1 JASPAR yes 22122494
chr2 121495305 121495319 PLAG1 JASPAR yes 76567512
chr2 121495308 121495319 EBF1 JASPAR yes 22122495
chr2 121495308 121495319 EBF1 JASPAR yes 76567513
chr2 121495321 121495342 IRF1 JASPAR yes 22122496
chr2 121495321 121495342 IRF1 JASPAR yes 76567514
chr2 121495325 121495340 STAT2 JASPAR yes 22122497
chr2 121495325 121495340 STAT2 JASPAR yes 76567515
chr2 121495341 121495358 BCL6B JASPAR yes 22122498
chr2 121495341 121495358 BCL6B JASPAR yes 76567516
chr2 121495342 121495353 E2F6 JASPAR yes 22122499
chr2 121495342 121495353 E2F6 JASPAR yes 76567517
chr2 121495372 121495381 SRY JASPAR yes 22122500
chr2 121495372 121495381 SRY JASPAR yes 76567518
chr2 121495373 121495384 FOXC1 JASPAR yes 22122501
chr2 121495373 121495384 FOXC1 JASPAR yes 76567519
chr2 121495373 121495385 FOXC2 JASPAR yes 22122502
chr2 121495373 121495385 FOXC2 JASPAR yes 76567520
chr2 121495374 121495386 FOXI1 JASPAR yes 22122503
chr2 121495374 121495386 FOXI1 JASPAR yes 76567521
chr2 121495381 121495401 TP53 JASPAR yes 22122504
chr2 121495381 121495401 TP53 JASPAR yes 76567522
chr2 121495388 121495394 NFIC JASPAR yes 22122505
chr2 121495388 121495394 NFIC JASPAR yes 76567523
chr2 121495401 121495411 SP1 JASPAR yes 22122506
chr2 121495401 121495411 SP1 JASPAR yes 76567524
chr2 121495402 121495416 TLX1 JASPAR yes 22122507
chr2 121495402 121495416 TLX1 JASPAR yes 76567525
chr2 121495408 121495417 NFIX JASPAR yes 22122508
chr2 121495408 121495417 NFIX JASPAR yes 76567526
chr2 121495408 121495418 NFIA JASPAR yes 22122509
chr2 121495408 121495418 NFIA JASPAR yes 76567527
chr2 121495410 121495416 NFIC JASPAR yes 22122510
chr2 121495410 121495416 NFIC JASPAR yes 76567528
chr2 121495419 121495433 FOXF2 JASPAR yes 22122511
chr2 121495419 121495433 FOXF2 JASPAR yes 76567529
chr2 121495419 121495434 FOXP1 JASPAR yes 22122512
chr2 121495419 121495434 FOXP1 JASPAR yes 76567530
chr2 121495420 121495431 FOXA1 JASPAR yes 22122513
chr2 121495420 121495431 FOXA1 JASPAR yes 76567531
chr2 121495420 121495435 FOXA1 JASPAR yes 22122514
chr2 121495420 121495435 FOXA1 JASPAR yes 76567532
chr2 121495421 121495432 FOXB1 JASPAR yes 22122515
chr2 121495421 121495432 FOXC1 JASPAR yes 22122516
chr2 121495421 121495432 FOXB1 JASPAR yes 76567533
chr2 121495421 121495432 FOXC1 JASPAR yes 76567534
chr2 121495421 121495433 FOXC2 JASPAR yes 22122517
chr2 121495421 121495433 FOXC2 JASPAR yes 76567535
chr2 121495422 121495433 FOXP2 JASPAR yes 22122518
chr2 121495422 121495433 FOXP2 JASPAR yes 76567536
chr2 121495458 121495472 SPIC JASPAR yes 22122519
chr2 121495458 121495472 SPIC JASPAR yes 76567537
chr2 121495465 121495471 PEA3 TRANSFAC yes 22122520
chr2 121495465 121495471 PEA3 TRANSFAC yes 76567538
chr2 121495473 121495478 SP1 TRANSFAC yes 22122521
chr2 121495473 121495478 SP1 TRANSFAC yes 76567539
chr2 121495474 121495479 SP1 TRANSFAC yes 22122522
chr2 121495474 121495479 SP1 TRANSFAC yes 76567540
chr2 121495501 121495518 NR3C1 JASPAR yes 22122523
chr2 121495501 121495518 NR3C2 JASPAR yes 22122524
chr2 121495501 121495518 NR3C1 JASPAR yes 76567541
chr2 121495501 121495518 NR3C2 JASPAR yes 76567542
chr2 121495501 121495519 NR3C1 JASPAR yes 22122525
chr2 121495501 121495519 NR3C1 JASPAR yes 76567543
chr2 121495502 121495512 TFCP2 JASPAR yes 22122526
chr2 121495502 121495512 TFCP2 JASPAR yes 76567544
chr2 121495503 121495518 AR JASPAR yes 22122527
chr2 121495503 121495518 AR JASPAR yes 76567545
chr2 121495522 121495531 ZEB1 JASPAR yes 22122528
chr2 121495522 121495531 ZEB1 JASPAR yes 76567546
chr2 121495525 121495530 USF2 TRANSFAC yes 22122529
chr2 121495525 121495530 USF2 TRANSFAC yes 76567547
chr2 121495543 121495548 SP1 TRANSFAC yes 22122530
chr2 121495543 121495548 SP1 TRANSFAC yes 76567548
chr2 121495548 121495552 YY1 TRANSFAC yes 22122531
chr2 121495548 121495552 YY1 TRANSFAC yes 76567549
chr2 121495549 121495557 FEV JASPAR yes 22122532
chr2 121495549 121495557 FEV JASPAR yes 76567550
chr2 121495551 121495556 ETS2 TRANSFAC yes 22122533
chr2 121495551 121495556 ETS2 TRANSFAC yes 76567551
chr2 121495565 121495575 NFKB1 JASPAR yes 22122534
chr2 121495565 121495575 RELA JASPAR yes 22122535
chr2 121495565 121495575 NFKB1 JASPAR yes 76567552
chr2 121495565 121495575 RELA JASPAR yes 76567553
chr2 121495565 121495576 NFKB1 JASPAR yes 22122536
chr2 121495565 121495576 NFKB1 JASPAR yes 76567554
chr2 121495579 121495589 RELA JASPAR yes 22122537
chr2 121495579 121495589 RELA JASPAR yes 76567555
chr2 121495580 121495591 NFKB1 JASPAR yes 22122538
chr2 121495580 121495591 NFKB1 JASPAR yes 76567556
chr2 121495596 121495601 TFAP2A TRANSFAC yes 22122539
chr2 121495596 121495601 TFAP2A TRANSFAC yes 76567557
chr2 121495596 121495602 MZF1 JASPAR yes 22122540
chr2 121495596 121495602 MZF1 JASPAR yes 76567558
chr2 121495606 121495621 TFAP2A JASPAR yes 22122541
chr2 121495606 121495621 TFAP2A JASPAR yes 76567559
chr2 121495608 121495623 TFAP2C JASPAR yes 22122542
chr2 121495608 121495623 TFAP2C JASPAR yes 76567560
chr2 121495609 121495620 EBF1 JASPAR yes 22122543
chr2 121495609 121495620 EBF1 JASPAR yes 76567561
chr2 121495610 121495619 TFAP2A JASPAR yes 22122544
chr2 121495610 121495619 TFAP2A JASPAR yes 76567562
chr2 121495614 121495619 SP1 TRANSFAC yes 22122545
chr2 121495614 121495619 SP1 TRANSFAC yes 76567563
chr2 121495634 121495639 MYC TRANSFAC yes 22122546
chr2 121495634 121495639 MYC TRANSFAC yes 76567564
SNP sites on vista32939[chr2:121495235-121495636]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 121495311 rs562603645 T C
E2F1 EBF1 PLAG1
5993924
chr2 121495355 rs559894638 A G
BCL6B E2F1
5993925
chr2 121495384 rs142627683 T C
FOXC1 FOXC2 FOXI1 TP53
5993926
chr2 121495405 rs546680438 G C
SP1 TLX1
5993927
chr2 121495406 rs151265247 C T
SP1 TLX1
5993928
chr2 121495432 rs550968600 A G
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXP1 FOXP2
5993929
chr2 121495464 rs140503048 G T
SPIC
5993930
chr2 121495602 rs697697 A G
MZF1
5993931
Genes possibly regulated by vista32939[chr2:121495235-121495636]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 121493199 121750229 + GLI2 ENSG00000074047.16 121493199 0.89 0.99 2733 97964
Expression level of Genes
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miRNAs possibly regulated by vista32939[chr2:121495235-121495636]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results