EnhancerDB
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  3. vista32961[chr2:122405703-122406017]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista32961[chr2:122405703-122406017]
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Tissue distribution of vista32961
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Transcription factor that possibly regulate vista32961[chr2:122405703-122406017]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 122405724 122405728 H1TF2 TRANSFAC yes 22123386
chr2 122405724 122405728 NFE TRANSFAC yes 22123387
chr2 122405724 122405728 SRF TRANSFAC yes 22123388
chr2 122405728 122405733 GATA2 JASPAR yes 22123389
chr2 122405752 122405756 ESR1 TRANSFAC yes 22123390
chr2 122405761 122405775 FOXF2 JASPAR yes 22123391
chr2 122405762 122405773 HOXC11 JASPAR yes 22123392
chr2 122405762 122405773 HOXC12 JASPAR yes 22123393
chr2 122405762 122405773 HOXC13 JASPAR yes 22123394
chr2 122405762 122405773 HOXD12 JASPAR yes 22123395
chr2 122405763 122405773 HOXC10 JASPAR yes 22123396
chr2 122405763 122405773 HOXD11 JASPAR yes 22123397
chr2 122405777 122405788 CDX2 JASPAR yes 22123398
chr2 122405778 122405788 MNX1 JASPAR yes 22123399
chr2 122405778 122405789 HOXA10 JASPAR yes 22123400
chr2 122405779 122405788 CDX1 JASPAR yes 22123401
chr2 122405779 122405789 HOXA13 JASPAR yes 22123402
chr2 122405779 122405789 HOXB13 JASPAR yes 22123403
chr2 122405779 122405789 HOXC10 JASPAR yes 22123404
chr2 122405779 122405789 HOXD13 JASPAR yes 22123405
chr2 122405781 122405793 FOXC2 JASPAR yes 22123406
chr2 122405784 122405793 SRY JASPAR yes 22123407
chr2 122405787 122405803 SOX8 JASPAR yes 22123408
chr2 122405806 122405811 MYB TRANSFAC yes 22123409
chr2 122405827 122405839 SRF JASPAR yes 22123410
chr2 122405833 122405848 HNF4G JASPAR yes 22123411
chr2 122405833 122405851 RARA JASPAR yes 22123412
chr2 122405834 122405849 HNF4A JASPAR yes 22123413
chr2 122405835 122405839 H4TF2 TRANSFAC yes 22123414
chr2 122405845 122405856 YY2 JASPAR yes 22123415
chr2 122405862 122405866 YY1 TRANSFAC yes 22123416
chr2 122405874 122405881 JUN TRANSFAC yes 22123417
chr2 122405883 122405903 PPARG JASPAR yes 22123418
chr2 122405894 122405908 EBF1 JASPAR yes 22123419
chr2 122405927 122405941 CREB3L1 JASPAR yes 22123420
chr2 122405937 122405952 PRDM1 JASPAR yes 22123421
chr2 122405937 122405955 IRF2 JASPAR yes 22123422
chr2 122405942 122405948 TCF4 TRANSFAC yes 22123423
chr2 122405945 122405956 DMRT3 JASPAR yes 22123424
chr2 122405983 122405987 ESR1 TRANSFAC yes 22123425
chr2 122405984 122406000 POU4F2 JASPAR yes 22123426
chr2 122405985 122405997 HNF1B JASPAR yes 22123427
chr2 122405989 122405993 YY1 TRANSFAC yes 22123428
SNP sites on vista32961[chr2:122405703-122406017]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 122405706 rs573258305 C A no 6000830
chr2 122405766 rs148723898 C A,T
FOXF2 HOXC10 HOXC11 HOXC12 HOXC13 HOXD11 HOXD12
6000831
Genes possibly regulated by vista32961[chr2:122405703-122406017]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 122095352 122407163 - CLASP1 ENSG00000074054.13 122407163 0.72 0.99 2735 98854
chr2 122484521 122494499 - MKI67IP ENSG00000155438.7 122494499 0.8 0.99 2736 11518
chr2 122494679 122525429 + TSN ENSG00000211460.7 122494679 0.68 0.99 2737 11338
Expression level of Genes
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miRNAs possibly regulated by vista32961[chr2:122405703-122406017]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results