EnhancerDB
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  3. vista330[chr1:10585199-10585569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista330[chr1:10585199-10585569]
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Tissue distribution of vista330
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Transcription factor that possibly regulate vista330[chr1:10585199-10585569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10585213 10585223 ALX3 JASPAR yes 26721340
chr1 10585213 10585223 EN2 JASPAR yes 26721341
chr1 10585213 10585223 ESX1 JASPAR yes 26721342
chr1 10585213 10585223 GBX2 JASPAR yes 26721343
chr1 10585213 10585223 GSX1 JASPAR yes 26721344
chr1 10585213 10585223 GSX2 JASPAR yes 26721345
chr1 10585213 10585223 LBX2 JASPAR yes 26721346
chr1 10585213 10585223 LHX2 JASPAR yes 26721347
chr1 10585213 10585223 ALX3 JASPAR yes 118228728
chr1 10585213 10585223 EN2 JASPAR yes 118228729
chr1 10585213 10585223 ESX1 JASPAR yes 118228730
chr1 10585213 10585223 GBX2 JASPAR yes 118228731
chr1 10585213 10585223 GSX1 JASPAR yes 118228732
chr1 10585213 10585223 GSX2 JASPAR yes 118228733
chr1 10585213 10585223 LBX2 JASPAR yes 118228734
chr1 10585213 10585223 LHX2 JASPAR yes 118228735
chr1 10585214 10585222 BARX1 JASPAR yes 26721348
chr1 10585214 10585222 BSX JASPAR yes 26721349
chr1 10585214 10585222 DLX6 JASPAR yes 26721350
chr1 10585214 10585222 ISX JASPAR yes 26721351
chr1 10585214 10585222 LBX1 JASPAR yes 26721352
chr1 10585214 10585222 LHX9 JASPAR yes 26721353
chr1 10585214 10585222 MSX1 JASPAR yes 26721354
chr1 10585214 10585222 MSX2 JASPAR yes 26721355
chr1 10585214 10585222 NKX6-2 JASPAR yes 26721356
chr1 10585214 10585222 PRRX1 JASPAR yes 26721357
chr1 10585214 10585222 RAX2 JASPAR yes 26721358
chr1 10585214 10585222 SHOX JASPAR yes 26721359
chr1 10585214 10585222 UNCX JASPAR yes 26721360
chr1 10585214 10585222 BARX1 JASPAR yes 118228736
chr1 10585214 10585222 BSX JASPAR yes 118228737
chr1 10585214 10585222 DLX6 JASPAR yes 118228738
chr1 10585214 10585222 ISX JASPAR yes 118228739
chr1 10585214 10585222 LBX1 JASPAR yes 118228740
chr1 10585214 10585222 LHX9 JASPAR yes 118228741
chr1 10585214 10585222 MSX1 JASPAR yes 118228742
chr1 10585214 10585222 MSX2 JASPAR yes 118228743
chr1 10585214 10585222 NKX6-2 JASPAR yes 118228744
chr1 10585214 10585222 PRRX1 JASPAR yes 118228745
chr1 10585214 10585222 RAX2 JASPAR yes 118228746
chr1 10585214 10585222 SHOX JASPAR yes 118228747
chr1 10585214 10585222 UNCX JASPAR yes 118228748
chr1 10585253 10585274 IRF1 JASPAR yes 26721361
chr1 10585253 10585274 IRF1 JASPAR yes 118228749
chr1 10585256 10585269 DUXA JASPAR yes 26721362
chr1 10585256 10585269 DUXA JASPAR yes 118228750
chr1 10585256 10585270 STAT1 JASPAR yes 26721363
chr1 10585256 10585270 STAT1 JASPAR yes 118228751
chr1 10585257 10585268 BATF JASPAR yes 26721364
chr1 10585257 10585268 DUX4 JASPAR yes 26721365
chr1 10585257 10585268 BATF JASPAR yes 118228752
chr1 10585257 10585268 DUX4 JASPAR yes 118228753
chr1 10585257 10585272 IRF9 JASPAR yes 26721366
chr1 10585257 10585272 IRF9 JASPAR yes 118228754
chr1 10585258 10585276 IRF2 JASPAR yes 26721367
chr1 10585258 10585276 IRF2 JASPAR yes 118228755
chr1 10585259 10585280 IRF1 JASPAR yes 26721368
chr1 10585259 10585280 IRF1 JASPAR yes 118228756
chr1 10585261 10585276 PRDM1 JASPAR yes 26721369
chr1 10585261 10585276 STAT2 JASPAR yes 26721370
chr1 10585261 10585276 PRDM1 JASPAR yes 118228757
chr1 10585261 10585276 STAT2 JASPAR yes 118228758
chr1 10585262 10585276 STAT1 JASPAR yes 26721371
chr1 10585262 10585276 STAT1 JASPAR yes 118228759
chr1 10585321 10585327 YY1 JASPAR yes 26721372
chr1 10585321 10585327 YY1 JASPAR yes 118228760
chr1 10585332 10585342 PAX3 JASPAR yes 26721373
chr1 10585332 10585342 PAX3 JASPAR yes 118228761
chr1 10585348 10585363 JUND JASPAR yes 26721374
chr1 10585348 10585363 JUND JASPAR yes 118228762
chr1 10585356 10585360 YY1 TRANSFAC yes 26721375
chr1 10585356 10585360 YY1 TRANSFAC yes 118228763
chr1 10585370 10585385 FOXP1 JASPAR yes 26721376
chr1 10585370 10585385 FOXP1 JASPAR yes 118228764
chr1 10585375 10585390 FOXP1 JASPAR yes 26721377
chr1 10585375 10585390 FOXP1 JASPAR yes 118228765
chr1 10585375 10585396 IRF1 JASPAR yes 26721378
chr1 10585375 10585396 IRF1 JASPAR yes 118228766
chr1 10585376 10585382 TBP TRANSFAC yes 26721379
chr1 10585376 10585382 TBP TRANSFAC yes 118228767
chr1 10585376 10585391 FOXP1 JASPAR yes 26721380
chr1 10585376 10585391 FOXP1 JASPAR yes 118228768
chr1 10585378 10585393 FOXP1 JASPAR yes 26721381
chr1 10585378 10585393 FOXP1 JASPAR yes 118228769
chr1 10585392 10585396 YY1 TRANSFAC yes 26721382
chr1 10585392 10585396 YY1 TRANSFAC yes 118228770
chr1 10585405 10585411 ATF1 TRANSFAC yes 26721383
chr1 10585405 10585411 ATF1 TRANSFAC yes 118228771
chr1 10585408 10585419 NRL JASPAR yes 26721384
chr1 10585408 10585419 NRL JASPAR yes 118228772
chr1 10585438 10585451 EOMES JASPAR yes 26721385
chr1 10585438 10585451 EOMES JASPAR yes 118228773
chr1 10585440 10585450 TBR1 JASPAR yes 26721386
chr1 10585440 10585450 TBR1 JASPAR yes 118228774
chr1 10585440 10585451 TBX20 JASPAR yes 26721387
chr1 10585440 10585451 TBX2 JASPAR yes 26721388
chr1 10585440 10585451 TBX20 JASPAR yes 118228775
chr1 10585440 10585451 TBX2 JASPAR yes 118228776
chr1 10585441 10585451 TBX21 JASPAR yes 26721389
chr1 10585441 10585451 TBX21 JASPAR yes 118228777
chr1 10585442 10585450 MGA JASPAR yes 26721390
chr1 10585442 10585450 TBX15 JASPAR yes 26721391
chr1 10585442 10585450 TBX1 JASPAR yes 26721392
chr1 10585442 10585450 TBX4 JASPAR yes 26721393
chr1 10585442 10585450 TBX5 JASPAR yes 26721394
chr1 10585442 10585450 MGA JASPAR yes 118228778
chr1 10585442 10585450 TBX15 JASPAR yes 118228779
chr1 10585442 10585450 TBX1 JASPAR yes 118228780
chr1 10585442 10585450 TBX4 JASPAR yes 118228781
chr1 10585442 10585450 TBX5 JASPAR yes 118228782
chr1 10585447 10585453 SOX10 JASPAR yes 26721395
chr1 10585447 10585453 SOX10 JASPAR yes 118228783
chr1 10585463 10585474 TBX20 JASPAR yes 26721396
chr1 10585463 10585474 TBX20 JASPAR yes 118228784
chr1 10585483 10585493 TBX21 JASPAR yes 26721397
chr1 10585483 10585493 TBX21 JASPAR yes 118228785
chr1 10585483 10585496 EOMES JASPAR yes 26721398
chr1 10585483 10585496 EOMES JASPAR yes 118228786
chr1 10585484 10585492 MGA JASPAR yes 26721399
chr1 10585484 10585492 TBX15 JASPAR yes 26721400
chr1 10585484 10585492 TBX1 JASPAR yes 26721401
chr1 10585484 10585492 TBX4 JASPAR yes 26721402
chr1 10585484 10585492 TBX5 JASPAR yes 26721403
chr1 10585484 10585492 MGA JASPAR yes 118228787
chr1 10585484 10585492 TBX15 JASPAR yes 118228788
chr1 10585484 10585492 TBX1 JASPAR yes 118228789
chr1 10585484 10585492 TBX4 JASPAR yes 118228790
chr1 10585484 10585492 TBX5 JASPAR yes 118228791
chr1 10585489 10585499 RORA JASPAR yes 26721404
chr1 10585489 10585499 RORA JASPAR yes 118228792
chr1 10585511 10585532 IRF1 JASPAR yes 26721405
chr1 10585511 10585532 IRF1 JASPAR yes 118228793
chr1 10585514 10585528 IRF8 JASPAR yes 26721406
chr1 10585514 10585528 IRF8 JASPAR yes 118228794
chr1 10585515 10585529 STAT1 JASPAR yes 26721407
chr1 10585515 10585529 STAT1 JASPAR yes 118228795
chr1 10585515 10585530 STAT2 JASPAR yes 26721408
chr1 10585515 10585530 STAT2 JASPAR yes 118228796
chr1 10585553 10585569 SRF JASPAR yes 26721409
chr1 10585553 10585569 SRF JASPAR yes 118228797
chr1 10585553 10585571 SRF JASPAR yes 26721410
chr1 10585553 10585571 SRF JASPAR yes 118228798
chr1 10585557 10585561 YY1 TRANSFAC yes 26721411
chr1 10585557 10585561 YY1 TRANSFAC yes 118228799
SNP sites on vista330[chr1:10585199-10585569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10585305 rs547582519 C T no 72530
chr1 10585315 rs17035154 A G no 72531
chr1 10585412 rs141578111 A G
NRL
72532
chr1 10585484 rs184188861 A G
EOMES MGA TBX1 TBX15 TBX21 TBX4 TBX5
72533
chr1 10585527 rs17035156 C A
IRF1 IRF8 STAT1 STAT2
72534
Genes possibly regulated by vista330[chr1:10585199-10585569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10490159 10512210 + APITD1 ENSG00000175279.17 10490159 0.77 0.94 136 4960
chr1 10490159 10512210 + APITD1-CORT ENSG00000251503.3 10490159 0.86 0.88 137 4960
chr1 10509776 10511959 + CORT ENSG00000241563.2 10509776 0.82 0.99 138 24577
chr1 10516579 10532583 - DFFA ENSG00000160049.7 10532583 0.75 1.0 139 47384
chr1 10532345 10690815 + PEX14 ENSG00000142655.8 10532345 0.57 1.0 140 47146
Expression level of Genes
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miRNAs possibly regulated by vista330[chr1:10585199-10585569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results