EnhancerDB
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  3. vista3342[chr1:153526279-153526545]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3342[chr1:153526279-153526545]
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Tissue distribution of vista3342
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Transcription factor that possibly regulate vista3342[chr1:153526279-153526545]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153526285 153526299 TCF7L2 JASPAR yes 118371168
chr1 153526285 153526300 LEF1 JASPAR yes 118371169
chr1 153526311 153526318 NKX3-1 JASPAR yes 118371170
chr1 153526322 153526336 SPI1 JASPAR yes 118371171
chr1 153526336 153526346 NFIA JASPAR yes 118371172
chr1 153526338 153526344 NFIC JASPAR yes 118371173
chr1 153526338 153526349 NFE2L2 JASPAR yes 118371174
chr1 153526362 153526366 H1TF2 TRANSFAC yes 118371175
chr1 153526362 153526366 NFE TRANSFAC yes 118371176
chr1 153526362 153526366 SRF TRANSFAC yes 118371177
chr1 153526377 153526391 JUN JASPAR yes 118371178
chr1 153526380 153526391 FOSL2 JASPAR yes 118371179
chr1 153526380 153526391 JUNB JASPAR yes 118371180
chr1 153526381 153526392 FOS JASPAR yes 118371181
chr1 153526381 153526392 FOSL1 JASPAR yes 118371182
chr1 153526381 153526392 JUND JASPAR yes 118371183
chr1 153526383 153526390 JUN TRANSFAC yes 118371184
chr1 153526398 153526409 USF1 JASPAR yes 118371185
chr1 153526403 153526417 RORA JASPAR yes 118371186
chr1 153526415 153526433 ESR2 JASPAR yes 118371187
chr1 153526418 153526422 LFA1 TRANSFAC yes 118371188
chr1 153526419 153526437 E2F3 JASPAR yes 118371189
chr1 153526425 153526430 SP1 TRANSFAC yes 118371190
chr1 153526432 153526436 YY1 TRANSFAC yes 118371191
chr1 153526477 153526481 NFE TRANSFAC yes 118371192
chr1 153526483 153526494 STAT1 JASPAR yes 118371193
chr1 153526508 153526518 GSC2 JASPAR yes 118371194
chr1 153526508 153526518 GSC JASPAR yes 118371195
chr1 153526509 153526517 OTX1 JASPAR yes 118371196
chr1 153526509 153526517 OTX2 JASPAR yes 118371197
chr1 153526509 153526517 RHOXF1 JASPAR yes 118371198
chr1 153526509 153526518 PITX3 JASPAR yes 118371199
chr1 153526531 153526537 NFIC JASPAR yes 118371200
SNP sites on vista3342[chr1:153526279-153526545]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153526311 rs80167124 A G
NKX3-1
634980
chr1 153526349 rs3953061 T A,C,G
NFE2L2
634981
Genes possibly regulated by vista3342[chr1:153526279-153526545]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153430220 153433177 - S100A7 ENSG00000143556.4 153433177 0.94 0.97 1268 6898
chr1 153507075 153508720 - S100A6 ENSG00000197956.5 153508720 0.76 1.0 1269 82441
chr1 153509623 153514241 - S100A5 ENSG00000196420.3 153514241 0.94 1.0 1270 87962
chr1 153516089 153522612 - S100A4 ENSG00000196154.7 153522612 0.83 0.99 1271 96333
chr1 153519805 153521848 - S100A3 ENSG00000188015.5 153521848 0.9 0.99 1272 95569
chr1 153533584 153540366 - S100A2 ENSG00000196754.6 153540366 1.0 1.0 1273 86179
chr1 153579362 153585621 - S100A16 ENSG00000188643.6 153585621 0.95 1.0 1274 40924
chr1 153586731 153589462 - S100A14 ENSG00000189334.4 153589462 0.95 1.0 1275 37083
chr1 153591263 153606568 - S100A13 ENSG00000189171.9 153606568 0.77 0.98 1276 19977
chr1 153600402 153604513 + S100A1 ENSG00000160678.7 153600402 0.88 0.93 1277 26143
chr1 153606525 153618782 + CHTOP ENSG00000160679.8 153606525 0.73 1.0 1278 20020
Expression level of Genes
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miRNAs possibly regulated by vista3342[chr1:153526279-153526545]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results