EnhancerDB
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  3. vista3350[chr1:153702935-153703414]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3350[chr1:153702935-153703414]
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Tissue distribution of vista3350
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Transcription factor that possibly regulate vista3350[chr1:153702935-153703414]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153703246 153703510 EBF1 UCSC Txn Factor no Conserved 107832222
chr1 153702930 153702947 RXRA JASPAR yes 32267065
chr1 153702930 153702947 RXRA JASPAR yes 118371518
chr1 153702934 153702949 LEF1 JASPAR yes 32267066
chr1 153702934 153702949 LEF1 JASPAR yes 118371519
chr1 153702935 153702949 TCF7L2 JASPAR yes 32267067
chr1 153702935 153702949 TCF7L2 JASPAR yes 118371520
chr1 153702937 153702944 TCF4 TRANSFAC yes 32267068
chr1 153702937 153702944 TCF4 TRANSFAC yes 118371521
chr1 153702938 153702944 LEF1 TRANSFAC yes 32267069
chr1 153702938 153702944 TCF4 TRANSFAC yes 32267070
chr1 153702938 153702944 LEF1 TRANSFAC yes 118371522
chr1 153702938 153702944 TCF4 TRANSFAC yes 118371523
chr1 153702940 153702948 RHOXF1 JASPAR yes 32267071
chr1 153702940 153702948 RHOXF1 JASPAR yes 118371524
chr1 153702954 153702971 RXRA JASPAR yes 32267072
chr1 153702954 153702971 RXRA JASPAR yes 118371525
chr1 153702966 153702970 LFA1 TRANSFAC yes 32267073
chr1 153702966 153702970 LFA1 TRANSFAC yes 118371526
chr1 153702985 153702995 REL JASPAR yes 32267074
chr1 153702985 153702995 REL JASPAR yes 118371527
chr1 153702990 153702996 MZF1 JASPAR yes 32267075
chr1 153702990 153702996 MZF1 JASPAR yes 118371528
chr1 153702992 153703002 SP1 TRANSFAC yes 32267076
chr1 153702992 153703002 SP1 TRANSFAC yes 118371529
chr1 153703031 153703042 PHOX2A JASPAR yes 32267077
chr1 153703031 153703042 PROP1 JASPAR yes 32267078
chr1 153703031 153703042 PHOX2A JASPAR yes 118371530
chr1 153703031 153703042 PROP1 JASPAR yes 118371531
chr1 153703053 153703068 AR JASPAR yes 32267079
chr1 153703053 153703068 AR JASPAR yes 118371532
chr1 153703054 153703065 SPDEF JASPAR yes 32267080
chr1 153703054 153703065 SPDEF JASPAR yes 118371533
chr1 153703073 153703087 CREB3 JASPAR yes 32267081
chr1 153703073 153703087 CREB3 JASPAR yes 118371534
chr1 153703076 153703081 ATF1 TRANSFAC yes 32267082
chr1 153703076 153703081 ATF1 TRANSFAC yes 118371535
chr1 153703099 153703110 NFE2L2 JASPAR yes 32267083
chr1 153703099 153703110 NFE2L2 JASPAR yes 118371536
chr1 153703102 153703117 ZIC3 JASPAR yes 32267084
chr1 153703102 153703117 ZIC3 JASPAR yes 118371537
chr1 153703129 153703134 ETS2 TRANSFAC yes 32267085
chr1 153703129 153703134 ETS2 TRANSFAC yes 118371538
chr1 153703139 153703143 YY1 TRANSFAC yes 32267086
chr1 153703139 153703143 YY1 TRANSFAC yes 118371539
chr1 153703147 153703162 MEF2C JASPAR yes 32267087
chr1 153703147 153703162 MEF2C JASPAR yes 118371540
chr1 153703149 153703164 FOXP1 JASPAR yes 32267088
chr1 153703149 153703164 FOXP1 JASPAR yes 118371541
chr1 153703167 153703181 RXRB JASPAR yes 32267089
chr1 153703167 153703181 RXRG JASPAR yes 32267090
chr1 153703167 153703181 RXRB JASPAR yes 118371542
chr1 153703167 153703181 RXRG JASPAR yes 118371543
chr1 153703167 153703182 NR2C2 JASPAR yes 32267091
chr1 153703167 153703182 NR2C2 JASPAR yes 118371544
chr1 153703175 153703194 RFX2 JASPAR yes 32267092
chr1 153703175 153703194 RFX2 JASPAR yes 118371545
chr1 153703179 153703187 FOXO3 JASPAR yes 32267093
chr1 153703179 153703187 FOXO3 JASPAR yes 118371546
chr1 153703185 153703206 ZNF263 JASPAR yes 32267094
chr1 153703185 153703206 ZNF263 JASPAR yes 118371547
chr1 153703186 153703207 ZNF263 JASPAR yes 32267095
chr1 153703186 153703207 ZNF263 JASPAR yes 118371548
chr1 153703188 153703209 ZNF263 JASPAR yes 32267096
chr1 153703188 153703209 ZNF263 JASPAR yes 118371549
chr1 153703194 153703204 SP1 JASPAR yes 32267097
chr1 153703194 153703204 SP1 JASPAR yes 118371550
chr1 153703196 153703202 MAZ TRANSFAC yes 32267098
chr1 153703196 153703202 MAZ TRANSFAC yes 118371551
chr1 153703196 153703207 E2F6 JASPAR yes 32267099
chr1 153703196 153703207 E2F6 JASPAR yes 118371552
chr1 153703198 153703206 SP1 TRANSFAC yes 32267100
chr1 153703198 153703206 SP1 TRANSFAC yes 118371553
chr1 153703198 153703208 SP1 JASPAR yes 32267101
chr1 153703198 153703208 SP1 JASPAR yes 118371554
chr1 153703200 153703206 MAZ TRANSFAC yes 32267102
chr1 153703200 153703206 MAZ TRANSFAC yes 118371555
chr1 153703203 153703224 IRF1 JASPAR yes 32267103
chr1 153703203 153703224 IRF1 JASPAR yes 118371556
chr1 153703205 153703220 STAT2 JASPAR yes 32267104
chr1 153703205 153703220 STAT2 JASPAR yes 118371557
chr1 153703206 153703220 SPIC JASPAR yes 32267105
chr1 153703206 153703220 STAT1 JASPAR yes 32267106
chr1 153703206 153703220 SPIC JASPAR yes 118371558
chr1 153703206 153703220 STAT1 JASPAR yes 118371559
chr1 153703208 153703223 FOXP1 JASPAR yes 32267107
chr1 153703208 153703223 FOXP1 JASPAR yes 118371560
chr1 153703220 153703234 POU1F1 JASPAR yes 32267108
chr1 153703220 153703234 POU1F1 JASPAR yes 118371561
chr1 153703234 153703240 ZNF354C JASPAR yes 32267109
chr1 153703234 153703240 ZNF354C JASPAR yes 118371562
chr1 153703252 153703273 ZNF263 JASPAR yes 32267110
chr1 153703252 153703273 ZNF263 JASPAR yes 118371563
chr1 153703260 153703270 MZF1 JASPAR yes 32267111
chr1 153703260 153703270 MZF1 JASPAR yes 118371564
chr1 153703261 153703278 RARA JASPAR yes 32267112
chr1 153703261 153703278 RARA JASPAR yes 118371565
chr1 153703266 153703287 ZNF263 JASPAR yes 32267113
chr1 153703266 153703287 ZNF263 JASPAR yes 118371566
chr1 153703271 153703286 HNF4A JASPAR yes 32267114
chr1 153703271 153703286 HNF4A JASPAR yes 118371567
chr1 153703272 153703286 RXRG JASPAR yes 32267115
chr1 153703272 153703286 RXRG JASPAR yes 118371568
chr1 153703272 153703287 HNF4G JASPAR yes 32267116
chr1 153703272 153703287 NR2C2 JASPAR yes 32267117
chr1 153703272 153703287 HNF4G JASPAR yes 118371569
chr1 153703272 153703287 NR2C2 JASPAR yes 118371570
chr1 153703276 153703282 SOX10 JASPAR yes 32267118
chr1 153703276 153703282 SOX10 JASPAR yes 118371571
chr1 153703278 153703293 HNF4A JASPAR yes 32267119
chr1 153703278 153703293 HNF4A JASPAR yes 118371572
chr1 153703279 153703294 HNF4G JASPAR yes 32267120
chr1 153703279 153703294 HNF4G JASPAR yes 118371573
chr1 153703280 153703293 POU2F2 JASPAR yes 32267121
chr1 153703280 153703293 POU2F2 JASPAR yes 118371574
chr1 153703286 153703300 POU1F1 JASPAR yes 32267122
chr1 153703286 153703300 POU1F1 JASPAR yes 118371575
chr1 153703288 153703292 YY1 TRANSFAC yes 32267123
chr1 153703288 153703292 YY1 TRANSFAC yes 118371576
chr1 153703292 153703307 HSF1 JASPAR yes 32267124
chr1 153703292 153703307 HSF1 JASPAR yes 118371577
chr1 153703293 153703306 HSF1 JASPAR yes 32267125
chr1 153703293 153703306 HSF2 JASPAR yes 32267126
chr1 153703293 153703306 HSF4 JASPAR yes 32267127
chr1 153703293 153703306 HSF1 JASPAR yes 118371578
chr1 153703293 153703306 HSF2 JASPAR yes 118371579
chr1 153703293 153703306 HSF4 JASPAR yes 118371580
chr1 153703296 153703307 STAT3 JASPAR yes 32267128
chr1 153703296 153703307 STAT3 JASPAR yes 118371581
chr1 153703319 153703323 YY1 TRANSFAC yes 32267129
chr1 153703319 153703323 YY1 TRANSFAC yes 118371582
chr1 153703329 153703333 H1TF2 TRANSFAC yes 32267130
chr1 153703329 153703333 NFE TRANSFAC yes 32267131
chr1 153703329 153703333 SRF TRANSFAC yes 32267132
chr1 153703329 153703333 H1TF2 TRANSFAC yes 118371583
chr1 153703329 153703333 NFE TRANSFAC yes 118371584
chr1 153703329 153703333 SRF TRANSFAC yes 118371585
chr1 153703329 153703349 RREB1 JASPAR yes 32267133
chr1 153703329 153703349 RREB1 JASPAR yes 118371586
chr1 153703348 153703353 GATA2 JASPAR yes 32267134
chr1 153703348 153703353 GATA2 JASPAR yes 118371587
chr1 153703350 153703356 MZF1 JASPAR yes 32267135
chr1 153703350 153703356 MZF1 JASPAR yes 118371588
chr1 153703373 153703382 THAP1 JASPAR yes 32267136
chr1 153703373 153703382 THAP1 JASPAR yes 118371589
chr1 153703376 153703380 LFA1 TRANSFAC yes 32267137
chr1 153703376 153703380 LFA1 TRANSFAC yes 118371590
chr1 153703396 153703403 SPIB JASPAR yes 32267138
chr1 153703396 153703403 SPIB JASPAR yes 118371591
chr1 153703408 153703414 MZF1 JASPAR yes 32267139
chr1 153703408 153703414 MZF1 JASPAR yes 118371592
SNP sites on vista3350[chr1:153702935-153703414]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153702979 rs114345989 C T no 636014
chr1 153703013 rs6698058 C T no 636015
chr1 153703017 rs535901345 ATTGTGTCTCTGC A no 636016
chr1 153703124 rs12076697 G A no 636017
chr1 153703130 rs578174896 G A
ETS2
636018
chr1 153703404 rs563904562 G A
EBF1
636019
Genes possibly regulated by vista3350[chr1:153702935-153703414]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153591263 153606568 - S100A13 ENSG00000189171.9 153606568 0.77 0.98 1276 3633
chr1 153606525 153618782 + CHTOP ENSG00000160679.8 153606525 0.73 1.0 1278 3590
chr1 153631130 153634306 + SNAPIN ENSG00000143553.6 153631130 0.54 0.99 1279 28195
chr1 153634512 153643524 - ILF2 ENSG00000143621.12 153643524 0.73 1.0 1280 40589
chr1 153651113 153666468 + NPR1 ENSG00000169418.9 153651113 0.84 0.96 1281 48178
chr1 153700543 153746555 + INTS3 ENSG00000143624.9 153700543 0.69 1.0 1282 97608
chr1 153746830 153752633 + SLC27A3 ENSG00000143554.9 153746830 0.68 1.0 1283 56584
Expression level of Genes
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miRNAs possibly regulated by vista3350[chr1:153702935-153703414]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results