EnhancerDB
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  3. vista3352[chr1:153714845-153715049]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3352[chr1:153714845-153715049]
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Tissue distribution of vista3352
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Transcription factor that possibly regulate vista3352[chr1:153714845-153715049]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153714834 153715109 RUNX3 UCSC Txn Factor no Conserved 107832250
chr1 153714915 153715053 ARID3A UCSC Txn Factor no Conserved 107832254
chr1 153714864 153714876 YY1 JASPAR yes 32268007
chr1 153714864 153714876 YY1 JASPAR yes 118371642
chr1 153714869 153714873 YY1 TRANSFAC yes 32268008
chr1 153714869 153714873 YY1 TRANSFAC yes 118371643
chr1 153714883 153714893 NFIA JASPAR yes 32268009
chr1 153714883 153714893 NFIA JASPAR yes 118371644
chr1 153714885 153714891 NFIC JASPAR yes 32268010
chr1 153714885 153714891 NFIC JASPAR yes 118371645
chr1 153714911 153714925 NR2F1 JASPAR yes 32268011
chr1 153714911 153714925 RXRB JASPAR yes 32268012
chr1 153714911 153714925 RXRG JASPAR yes 32268013
chr1 153714911 153714925 NR2F1 JASPAR yes 118371646
chr1 153714911 153714925 RXRB JASPAR yes 118371647
chr1 153714911 153714925 RXRG JASPAR yes 118371648
chr1 153714913 153714928 HNF1A JASPAR yes 32268014
chr1 153714913 153714928 HNF1A JASPAR yes 118371649
chr1 153714914 153714927 HNF1B JASPAR yes 32268015
chr1 153714914 153714927 HNF1B JASPAR yes 118371650
chr1 153714915 153714927 HNF1B JASPAR yes 32268016
chr1 153714915 153714927 HNF1B JASPAR yes 118371651
chr1 153714918 153714932 STAT1 JASPAR yes 32268017
chr1 153714918 153714932 STAT1 JASPAR yes 118371652
chr1 153714923 153714926 MYB TRANSFAC yes 32268018
chr1 153714923 153714926 MYB TRANSFAC yes 118371653
chr1 153714923 153714934 FLI1 JASPAR yes 32268019
chr1 153714923 153714934 FLI1 JASPAR yes 118371654
chr1 153714924 153714934 ETV6 JASPAR yes 32268020
chr1 153714924 153714934 ETV6 JASPAR yes 118371655
chr1 153714924 153714935 ELF5 JASPAR yes 32268021
chr1 153714924 153714935 ELF5 JASPAR yes 118371656
chr1 153714924 153714937 ELF1 JASPAR yes 32268022
chr1 153714924 153714937 ELF1 JASPAR yes 118371657
chr1 153714924 153714938 SPI1 JASPAR yes 32268023
chr1 153714924 153714938 SPIC JASPAR yes 32268024
chr1 153714924 153714938 SPI1 JASPAR yes 118371658
chr1 153714924 153714938 SPIC JASPAR yes 118371659
chr1 153714925 153714932 SPI1 JASPAR yes 32268025
chr1 153714925 153714932 SPI1 JASPAR yes 118371660
chr1 153714925 153714933 EHF JASPAR yes 32268026
chr1 153714925 153714933 EHF JASPAR yes 118371661
chr1 153714927 153714934 SPIB JASPAR yes 32268027
chr1 153714927 153714934 SPIB JASPAR yes 118371662
chr1 153714950 153714970 RREB1 JASPAR yes 32268028
chr1 153714950 153714970 RREB1 JASPAR yes 118371663
chr1 153714952 153714972 RREB1 JASPAR yes 32268029
chr1 153714952 153714972 RREB1 JASPAR yes 118371664
chr1 153714954 153714974 RREB1 JASPAR yes 32268030
chr1 153714954 153714974 RREB1 JASPAR yes 118371665
chr1 153714956 153714976 RREB1 JASPAR yes 32268031
chr1 153714956 153714976 RREB1 JASPAR yes 118371666
chr1 153714958 153714978 RREB1 JASPAR yes 32268032
chr1 153714958 153714978 RREB1 JASPAR yes 118371667
chr1 153714960 153714980 RREB1 JASPAR yes 32268033
chr1 153714960 153714980 RREB1 JASPAR yes 118371668
chr1 153714962 153714982 RREB1 JASPAR yes 32268034
chr1 153714962 153714982 RREB1 JASPAR yes 118371669
chr1 153714964 153714984 RREB1 JASPAR yes 32268035
chr1 153714964 153714984 RREB1 JASPAR yes 118371670
chr1 153714966 153714986 RREB1 JASPAR yes 32268036
chr1 153714966 153714986 RREB1 JASPAR yes 118371671
chr1 153714968 153714988 RREB1 JASPAR yes 32268037
chr1 153714968 153714988 RREB1 JASPAR yes 118371672
chr1 153714992 153715012 RREB1 JASPAR yes 32268038
chr1 153714992 153715012 RREB1 JASPAR yes 118371673
chr1 153714998 153715013 RUNX2 JASPAR yes 32268039
chr1 153714998 153715013 RUNX2 JASPAR yes 118371674
chr1 153715008 153715024 RFX2 JASPAR yes 32268040
chr1 153715008 153715024 RFX3 JASPAR yes 32268041
chr1 153715008 153715024 RFX4 JASPAR yes 32268042
chr1 153715008 153715024 RFX2 JASPAR yes 118371675
chr1 153715008 153715024 RFX3 JASPAR yes 118371676
chr1 153715008 153715024 RFX4 JASPAR yes 118371677
chr1 153715010 153715025 MEF2C JASPAR yes 32268043
chr1 153715010 153715025 MEF2C JASPAR yes 118371678
chr1 153715011 153715026 MEF2A JASPAR yes 32268044
chr1 153715011 153715026 MEF2A JASPAR yes 118371679
chr1 153715012 153715024 MEF2A JASPAR yes 32268045
chr1 153715012 153715024 MEF2D JASPAR yes 32268046
chr1 153715012 153715024 MEF2A JASPAR yes 118371680
chr1 153715012 153715024 MEF2D JASPAR yes 118371681
chr1 153715014 153715018 TEAD2 TRANSFAC yes 32268047
chr1 153715014 153715018 TEAD2 TRANSFAC yes 118371682
chr1 153715014 153715019 TBP TRANSFAC yes 32268048
chr1 153715014 153715019 TBP TRANSFAC yes 118371683
chr1 153715014 153715020 TMF TRANSFAC yes 32268049
chr1 153715014 153715020 TMF TRANSFAC yes 118371684
chr1 153715027 153715037 TEAD1 JASPAR yes 32268050
chr1 153715027 153715037 TEAD4 JASPAR yes 32268051
chr1 153715027 153715037 TEAD1 JASPAR yes 118371685
chr1 153715027 153715037 TEAD4 JASPAR yes 118371686
chr1 153715034 153715038 YY1 TRANSFAC yes 32268052
chr1 153715034 153715038 YY1 TRANSFAC yes 118371687
chr1 153715037 153715048 BATF JASPAR yes 32268053
chr1 153715037 153715048 BATF JASPAR yes 118371688
SNP sites on vista3352[chr1:153714845-153715049]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153714954 rs35008806 CTG C
ARID3A RREB1 RUNX3
636098
chr1 153714954 rs552215154 C G
ARID3A RREB1 RUNX3
636099
chr1 153714954 rs749965423 CTG C
ARID3A RREB1 RUNX3
636100
chr1 153714956 rs200891564 G C
ARID3A RREB1 RUNX3
636101
chr1 153714989 rs538019741 C T
ARID3A RUNX3
636102
chr1 153715023 rs568002984 C G
ARID3A MEF2A MEF2C MEF2D RFX2 RFX3 RFX4 RUNX3
636103
Genes possibly regulated by vista3352[chr1:153714845-153715049]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153631130 153634306 + SNAPIN ENSG00000143553.6 153631130 0.54 0.99 1279 16285
chr1 153634512 153643524 - ILF2 ENSG00000143621.12 153643524 0.73 1.0 1280 28679
chr1 153651113 153666468 + NPR1 ENSG00000169418.9 153651113 0.84 0.96 1281 36268
chr1 153700543 153746555 + INTS3 ENSG00000143624.9 153700543 0.69 1.0 1282 85698
chr1 153746830 153752633 + SLC27A3 ENSG00000143554.9 153746830 0.68 1.0 1283 68219
Expression level of Genes
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miRNAs possibly regulated by vista3352[chr1:153714845-153715049]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results