EnhancerDB
  1. Home
  2. Enhancers
  3. vista3354[chr1:153716388-153716727]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3354[chr1:153716388-153716727]
Back to top
Tissue distribution of vista3354
Back to top
Transcription factor that possibly regulate vista3354[chr1:153716388-153716727]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153716378 153716398 PPARG JASPAR yes 32268244
chr1 153716378 153716398 PPARG JASPAR yes 118371728
chr1 153716389 153716394 SP1 TRANSFAC yes 32268245
chr1 153716389 153716394 SP1 TRANSFAC yes 118371729
chr1 153716395 153716408 SMAD2 JASPAR yes 32268246
chr1 153716395 153716408 SMAD2 JASPAR yes 118371730
chr1 153716399 153716413 CREB3 JASPAR yes 32268247
chr1 153716399 153716413 CREB3L1 JASPAR yes 32268248
chr1 153716399 153716413 CREB3 JASPAR yes 118371731
chr1 153716399 153716413 CREB3L1 JASPAR yes 118371732
chr1 153716428 153716433 GATA2 JASPAR yes 32268249
chr1 153716428 153716433 GATA2 JASPAR yes 118371733
chr1 153716436 153716442 YY1 JASPAR yes 32268250
chr1 153716436 153716442 YY1 JASPAR yes 118371734
chr1 153716449 153716467 IRF2 JASPAR yes 32268251
chr1 153716449 153716467 IRF2 JASPAR yes 118371735
chr1 153716450 153716471 IRF1 JASPAR yes 32268252
chr1 153716450 153716471 IRF1 JASPAR yes 118371736
chr1 153716452 153716467 PRDM1 JASPAR yes 32268253
chr1 153716452 153716467 STAT2 JASPAR yes 32268254
chr1 153716452 153716467 PRDM1 JASPAR yes 118371737
chr1 153716452 153716467 STAT2 JASPAR yes 118371738
chr1 153716454 153716466 IRF1 JASPAR yes 32268255
chr1 153716454 153716466 IRF1 JASPAR yes 118371739
chr1 153716454 153716468 IRF7 JASPAR yes 32268256
chr1 153716454 153716468 IRF7 JASPAR yes 118371740
chr1 153716474 153716495 ZNF263 JASPAR yes 32268257
chr1 153716474 153716495 ZNF263 JASPAR yes 118371741
chr1 153716475 153716496 ZNF263 JASPAR yes 32268258
chr1 153716475 153716496 ZNF263 JASPAR yes 118371742
chr1 153716479 153716493 SPI1 JASPAR yes 32268259
chr1 153716479 153716493 SPI1 JASPAR yes 118371743
chr1 153716513 153716533 RREB1 JASPAR yes 32268260
chr1 153716513 153716533 RREB1 JASPAR yes 118371744
chr1 153716515 153716535 RREB1 JASPAR yes 32268261
chr1 153716515 153716535 RREB1 JASPAR yes 118371745
chr1 153716517 153716537 RREB1 JASPAR yes 32268262
chr1 153716517 153716537 RREB1 JASPAR yes 118371746
chr1 153716519 153716539 RREB1 JASPAR yes 32268263
chr1 153716519 153716539 RREB1 JASPAR yes 118371747
chr1 153716521 153716541 RREB1 JASPAR yes 32268264
chr1 153716521 153716541 RREB1 JASPAR yes 118371748
chr1 153716523 153716543 RREB1 JASPAR yes 32268265
chr1 153716523 153716543 RREB1 JASPAR yes 118371749
chr1 153716525 153716545 RREB1 JASPAR yes 32268266
chr1 153716525 153716545 RREB1 JASPAR yes 118371750
chr1 153716527 153716547 RREB1 JASPAR yes 32268267
chr1 153716527 153716547 RREB1 JASPAR yes 118371751
chr1 153716529 153716549 RREB1 JASPAR yes 32268268
chr1 153716529 153716549 RREB1 JASPAR yes 118371752
chr1 153716531 153716551 RREB1 JASPAR yes 32268269
chr1 153716531 153716551 RREB1 JASPAR yes 118371753
chr1 153716533 153716553 RREB1 JASPAR yes 32268270
chr1 153716533 153716553 RREB1 JASPAR yes 118371754
chr1 153716535 153716555 RREB1 JASPAR yes 32268271
chr1 153716535 153716555 RREB1 JASPAR yes 118371755
chr1 153716537 153716557 RREB1 JASPAR yes 32268272
chr1 153716537 153716557 RREB1 JASPAR yes 118371756
chr1 153716539 153716559 RREB1 JASPAR yes 32268273
chr1 153716539 153716559 RREB1 JASPAR yes 118371757
chr1 153716570 153716577 NFATC2 JASPAR yes 32268274
chr1 153716570 153716577 NFATC2 JASPAR yes 118371758
chr1 153716579 153716598 PAX5 JASPAR yes 32268275
chr1 153716579 153716598 PAX5 JASPAR yes 118371759
chr1 153716581 153716585 ESR1 TRANSFAC yes 32268276
chr1 153716581 153716585 ESR1 TRANSFAC yes 118371760
chr1 153716582 153716593 NRL JASPAR yes 32268277
chr1 153716582 153716593 NRL JASPAR yes 118371761
chr1 153716587 153716599 IRF1 JASPAR yes 32268278
chr1 153716587 153716599 IRF1 JASPAR yes 118371762
chr1 153716607 153716610 MYB TRANSFAC yes 32268279
chr1 153716607 153716610 MYB TRANSFAC yes 118371763
chr1 153716609 153716622 ZBTB18 JASPAR yes 32268280
chr1 153716609 153716622 ZBTB18 JASPAR yes 118371764
chr1 153716649 153716653 YY1 TRANSFAC yes 32268281
chr1 153716649 153716653 YY1 TRANSFAC yes 118371765
chr1 153716660 153716675 RUNX2 JASPAR yes 32268282
chr1 153716660 153716675 RUNX2 JASPAR yes 118371766
chr1 153716662 153716667 MYC TRANSFAC yes 32268283
chr1 153716662 153716667 MYC TRANSFAC yes 118371767
chr1 153716663 153716674 RUNX1 JASPAR yes 32268284
chr1 153716663 153716674 RUNX1 JASPAR yes 118371768
chr1 153716664 153716674 RUNX3 JASPAR yes 32268285
chr1 153716664 153716674 RUNX3 JASPAR yes 118371769
chr1 153716665 153716674 RUNX2 JASPAR yes 32268286
chr1 153716665 153716674 RUNX2 JASPAR yes 118371770
chr1 153716689 153716703 STAT1 JASPAR yes 32268287
chr1 153716689 153716703 STAT1 JASPAR yes 118371771
chr1 153716711 153716716 GATA1 TRANSFAC yes 32268288
chr1 153716711 153716716 GATA1 TRANSFAC yes 118371772
chr1 153716718 153716722 NFE TRANSFAC yes 32268289
chr1 153716718 153716722 NFE TRANSFAC yes 118371773
chr1 153716725 153716738 NR2F1 JASPAR yes 32268290
chr1 153716725 153716738 NR2F1 JASPAR yes 118371774
SNP sites on vista3354[chr1:153716388-153716727]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153716416 rs189974352 C T no 636113
chr1 153716449 rs151078111 C T
IRF2
636114
chr1 153716483 rs545773284 T G
SPI1 ZNF263
636115
chr1 153716516 rs563883474 T C
RREB1
636116
Genes possibly regulated by vista3354[chr1:153716388-153716727]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153631130 153634306 + SNAPIN ENSG00000143553.6 153631130 0.54 0.99 1279 14742
chr1 153634512 153643524 - ILF2 ENSG00000143621.12 153643524 0.73 1.0 1280 27136
chr1 153651113 153666468 + NPR1 ENSG00000169418.9 153651113 0.84 0.96 1281 34725
chr1 153700543 153746555 + INTS3 ENSG00000143624.9 153700543 0.69 1.0 1282 84155
chr1 153746830 153752633 + SLC27A3 ENSG00000143554.9 153746830 0.68 1.0 1283 69897
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3354[chr1:153716388-153716727]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results