EnhancerDB
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  3. vista3359[chr1:153824989-153825297]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3359[chr1:153824989-153825297]
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Tissue distribution of vista3359
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Transcription factor that possibly regulate vista3359[chr1:153824989-153825297]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153825003 153825008 GATA2 JASPAR yes 32272498
chr1 153825003 153825008 GATA2 JASPAR yes 118372032
chr1 153825006 153825010 H1TF2 TRANSFAC yes 32272499
chr1 153825006 153825010 NFE TRANSFAC yes 32272500
chr1 153825006 153825010 SRF TRANSFAC yes 32272501
chr1 153825006 153825010 H1TF2 TRANSFAC yes 118372033
chr1 153825006 153825010 NFE TRANSFAC yes 118372034
chr1 153825006 153825010 SRF TRANSFAC yes 118372035
chr1 153825012 153825017 ETS2 TRANSFAC yes 32272502
chr1 153825012 153825017 ETS2 TRANSFAC yes 118372036
chr1 153825016 153825023 NFATC2 JASPAR yes 32272503
chr1 153825016 153825023 NFATC2 JASPAR yes 118372037
chr1 153825046 153825051 GATA2 JASPAR yes 32272504
chr1 153825046 153825051 GATA2 JASPAR yes 118372038
chr1 153825062 153825080 NFYA JASPAR yes 32272505
chr1 153825062 153825080 NFYA JASPAR yes 118372039
chr1 153825068 153825083 NFYB JASPAR yes 32272506
chr1 153825068 153825083 NFYB JASPAR yes 118372040
chr1 153825070 153825075 NFY TRANSFAC yes 32272507
chr1 153825070 153825075 NFY TRANSFAC yes 118372041
chr1 153825072 153825078 NFIC JASPAR yes 32272508
chr1 153825072 153825078 NFIC JASPAR yes 118372042
chr1 153825087 153825097 GABPA JASPAR yes 32272509
chr1 153825087 153825097 GABPA JASPAR yes 118372043
chr1 153825087 153825100 ELF1 JASPAR yes 32272510
chr1 153825087 153825100 ELF1 JASPAR yes 118372044
chr1 153825087 153825102 STAT1 JASPAR yes 32272511
chr1 153825087 153825102 STAT1 JASPAR yes 118372045
chr1 153825089 153825100 STAT1 JASPAR yes 32272512
chr1 153825089 153825100 STAT3 JASPAR yes 32272513
chr1 153825089 153825100 STAT1 JASPAR yes 118372046
chr1 153825089 153825100 STAT3 JASPAR yes 118372047
chr1 153825097 153825110 DUXA JASPAR yes 32272514
chr1 153825097 153825110 DUXA JASPAR yes 118372048
chr1 153825098 153825109 DUX4 JASPAR yes 32272515
chr1 153825098 153825109 PHOX2A JASPAR yes 32272516
chr1 153825098 153825109 DUX4 JASPAR yes 118372049
chr1 153825098 153825109 PHOX2A JASPAR yes 118372050
chr1 153825131 153825137 HiNF-A TRANSFAC yes 32272517
chr1 153825131 153825137 HiNF-A TRANSFAC yes 118372051
chr1 153825166 153825169 MYB TRANSFAC yes 32272518
chr1 153825166 153825169 MYB TRANSFAC yes 118372052
chr1 153825243 153825255 TEF JASPAR yes 32272519
chr1 153825243 153825255 TEF JASPAR yes 118372053
chr1 153825245 153825248 MYB TRANSFAC yes 32272520
chr1 153825245 153825248 MYB TRANSFAC yes 118372054
chr1 153825250 153825253 MYB TRANSFAC yes 32272521
chr1 153825250 153825253 MYB TRANSFAC yes 118372055
chr1 153825277 153825282 GATA2 JASPAR yes 32272522
chr1 153825277 153825282 GATA2 JASPAR yes 118372056
chr1 153825297 153825312 MEF2C JASPAR yes 32272523
chr1 153825297 153825312 MEF2C JASPAR yes 118372057
chr1 153825297 153825318 ZNF263 JASPAR yes 32272524
chr1 153825297 153825318 ZNF263 JASPAR yes 118372058
SNP sites on vista3359[chr1:153824989-153825297]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153825002 rs183017881 C T no 636554
chr1 153825173 rs187309596 T C no 636555
chr1 153825193 rs138776364 G A no 636556
chr1 153825208 rs4540690 A G no 636557
chr1 153825224 rs115018417 T C no 636558
Genes possibly regulated by vista3359[chr1:153824989-153825297]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153746830 153752633 + SLC27A3 ENSG00000143554.9 153746830 0.68 1.0 1283 21841
chr1 153777201 153895451 - GATAD2B ENSG00000143614.7 153895451 0.61 1.0 1284 29846
chr1 153901977 153919172 - DENND4B ENSG00000198837.5 153919172 0.76 1.0 1285 6125
Expression level of Genes
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miRNAs possibly regulated by vista3359[chr1:153824989-153825297]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results