EnhancerDB
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  3. vista336[chr1:10757179-10757344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista336[chr1:10757179-10757344]
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Tissue distribution of vista336
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Transcription factor that possibly regulate vista336[chr1:10757179-10757344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10757209 10757223 RORA JASPAR yes 26736149
chr1 10757209 10757223 RORA JASPAR yes 118229002
chr1 10757212 10757222 RORA JASPAR yes 26736150
chr1 10757212 10757222 RORA JASPAR yes 118229003
chr1 10757213 10757224 ESRRA JASPAR yes 26736151
chr1 10757213 10757224 ESRRB JASPAR yes 26736152
chr1 10757213 10757224 ESRRA JASPAR yes 118229004
chr1 10757213 10757224 ESRRB JASPAR yes 118229005
chr1 10757215 10757223 NR4A2 JASPAR yes 26736153
chr1 10757215 10757223 NR4A2 JASPAR yes 118229006
chr1 10757217 10757221 ESR1 TRANSFAC yes 26736154
chr1 10757217 10757221 ESR1 TRANSFAC yes 118229007
chr1 10757226 10757231 SP1 TRANSFAC yes 26736155
chr1 10757226 10757231 SP1 TRANSFAC yes 118229008
chr1 10757250 10757264 JUN JASPAR yes 26736156
chr1 10757250 10757264 JUN JASPAR yes 118229009
chr1 10757252 10757263 BATF JASPAR yes 26736157
chr1 10757252 10757263 BATF JASPAR yes 118229010
chr1 10757253 10757264 FOSL2 JASPAR yes 26736158
chr1 10757253 10757264 JUNB JASPAR yes 26736159
chr1 10757253 10757264 FOSL2 JASPAR yes 118229011
chr1 10757253 10757264 JUNB JASPAR yes 118229012
chr1 10757254 10757265 FOS JASPAR yes 26736160
chr1 10757254 10757265 FOSL1 JASPAR yes 26736161
chr1 10757254 10757265 JUND JASPAR yes 26736162
chr1 10757254 10757265 FOS JASPAR yes 118229013
chr1 10757254 10757265 FOSL1 JASPAR yes 118229014
chr1 10757254 10757265 JUND JASPAR yes 118229015
chr1 10757255 10757264 JDP2 JASPAR yes 26736163
chr1 10757255 10757264 JDP2 JASPAR yes 118229016
chr1 10757255 10757269 JUN JASPAR yes 26736164
chr1 10757255 10757269 JUN JASPAR yes 118229017
chr1 10757256 10757263 JUN TRANSFAC yes 26736165
chr1 10757256 10757263 JUN TRANSFAC yes 118229018
chr1 10757265 10757276 NFE2L2 JASPAR yes 26736166
chr1 10757265 10757276 NFE2L2 JASPAR yes 118229019
chr1 10757279 10757284 SP1 TRANSFAC yes 26736167
chr1 10757279 10757284 SP1 TRANSFAC yes 118229020
chr1 10757297 10757307 ZNF740 JASPAR yes 26736168
chr1 10757297 10757307 ZNF740 JASPAR yes 118229021
chr1 10757298 10757308 ZNF740 JASPAR yes 26736169
chr1 10757298 10757308 ZNF740 JASPAR yes 118229022
chr1 10757298 10757319 ZNF263 JASPAR yes 26736170
chr1 10757298 10757319 ZNF263 JASPAR yes 118229023
chr1 10757300 10757321 ZNF263 JASPAR yes 26736171
chr1 10757300 10757321 ZNF263 JASPAR yes 118229024
chr1 10757301 10757322 ZNF263 JASPAR yes 26736172
chr1 10757301 10757322 ZNF263 JASPAR yes 118229025
chr1 10757303 10757324 IRF1 JASPAR yes 26736173
chr1 10757303 10757324 IRF1 JASPAR yes 118229026
chr1 10757305 10757320 PRDM1 JASPAR yes 26736174
chr1 10757305 10757320 PRDM1 JASPAR yes 118229027
chr1 10757311 10757326 PRDM1 JASPAR yes 26736175
chr1 10757311 10757326 PRDM1 JASPAR yes 118229028
chr1 10757328 10757333 GATA1 TRANSFAC yes 26736176
chr1 10757328 10757333 GATA1 TRANSFAC yes 118229029
SNP sites on vista336[chr1:10757179-10757344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10757198 rs555459109 G A no 74029
chr1 10757199 rs4845948 G T no 74030
chr1 10757234 rs145398174 G A no 74031
chr1 10757298 rs34408884 G GC
ZNF263 ZNF740
74032
Genes possibly regulated by vista336[chr1:10757179-10757344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10696661 10856707 - CASZ1 ENSG00000130940.10 10856707 0.83 1.0 141 637
Expression level of Genes
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miRNAs possibly regulated by vista336[chr1:10757179-10757344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr12 54427794 54427815 + hsa-miR-615-3p MIMAT0003283 54410671 0.004709576138147566 0.852699 0.81487 303
Expression level of miRNAs
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