EnhancerDB
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  3. vista3364[chr1:153936554-153936861]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3364[chr1:153936554-153936861]
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Tissue distribution of vista3364
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Transcription factor that possibly regulate vista3364[chr1:153936554-153936861]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 153935444 153936980 POLR2A UCSC Txn Factor no Conserved 107832358
chr1 153936157 153936939 E2F1 UCSC Txn Factor no Conserved 107832362
chr1 153936521 153936918 TFAP2C UCSC Txn Factor no Conserved 107832390
chr1 153936631 153936897 TFAP2A UCSC Txn Factor no Conserved 107832399
chr1 153936534 153936555 ZNF263 JASPAR yes 32278398
chr1 153936534 153936555 ZNF263 JASPAR yes 118372164
chr1 153936604 153936623 CTCF JASPAR yes 32278399
chr1 153936604 153936623 CTCF JASPAR yes 118372165
chr1 153936614 153936624 FIGLA JASPAR yes 32278400
chr1 153936614 153936624 TCF4 JASPAR yes 32278401
chr1 153936614 153936624 FIGLA JASPAR yes 118372166
chr1 153936614 153936624 TCF4 JASPAR yes 118372167
chr1 153936616 153936625 ZEB1 JASPAR yes 32278402
chr1 153936616 153936625 ZEB1 JASPAR yes 118372168
chr1 153936618 153936623 SP1 TRANSFAC yes 32278403
chr1 153936618 153936623 SP1 TRANSFAC yes 118372169
chr1 153936619 153936629 SP1 JASPAR yes 32278404
chr1 153936619 153936629 SP1 JASPAR yes 118372170
chr1 153936622 153936627 SP1 TRANSFAC yes 32278405
chr1 153936622 153936627 SP1 TRANSFAC yes 118372171
chr1 153936623 153936635 HINFP JASPAR yes 32278406
chr1 153936623 153936635 HINFP JASPAR yes 118372172
chr1 153936624 153936629 TFAP2A TRANSFAC yes 32278407
chr1 153936624 153936629 TFAP2A TRANSFAC yes 118372173
chr1 153936624 153936630 MZF1 JASPAR yes 32278408
chr1 153936624 153936630 MZF1 JASPAR yes 118372174
chr1 153936624 153936638 CREB3L1 JASPAR yes 32278409
chr1 153936624 153936638 CREB3L1 JASPAR yes 118372175
chr1 153936633 153936638 SP1 TRANSFAC yes 32278410
chr1 153936633 153936638 SP1 TRANSFAC yes 118372176
chr1 153936641 153936649 TEAD3 JASPAR yes 32278411
chr1 153936641 153936649 TEAD3 JASPAR yes 118372177
chr1 153936670 153936675 ETS2 TRANSFAC yes 32278412
chr1 153936670 153936675 ETS2 TRANSFAC yes 118372178
chr1 153936671 153936682 NFKB1 JASPAR yes 32278413
chr1 153936671 153936682 NFKB1 JASPAR yes 118372179
chr1 153936685 153936695 TEAD1 JASPAR yes 32278414
chr1 153936685 153936695 TEAD4 JASPAR yes 32278415
chr1 153936685 153936695 TEAD1 JASPAR yes 118372180
chr1 153936685 153936695 TEAD4 JASPAR yes 118372181
chr1 153936686 153936694 TEAD3 JASPAR yes 32278416
chr1 153936686 153936694 TEAD3 JASPAR yes 118372182
chr1 153936694 153936699 GATA2 JASPAR yes 32278417
chr1 153936694 153936699 GATA2 JASPAR yes 118372183
chr1 153936708 153936719 NRF1 JASPAR yes 32278418
chr1 153936708 153936719 NRF1 JASPAR yes 118372184
chr1 153936710 153936722 TFAP2A JASPAR yes 32278419
chr1 153936710 153936722 TFAP2B JASPAR yes 32278420
chr1 153936710 153936722 TFAP2C JASPAR yes 32278421
chr1 153936710 153936722 TFAP2A JASPAR yes 118372185
chr1 153936710 153936722 TFAP2B JASPAR yes 118372186
chr1 153936710 153936722 TFAP2C JASPAR yes 118372187
chr1 153936731 153936745 E2F7 JASPAR yes 32278422
chr1 153936731 153936745 E2F7 JASPAR yes 118372188
chr1 153936734 153936742 TBX15 JASPAR yes 32278423
chr1 153936734 153936742 TBX15 JASPAR yes 118372189
chr1 153936734 153936743 ZEB1 JASPAR yes 32278424
chr1 153936734 153936743 ZEB1 JASPAR yes 118372190
chr1 153936737 153936742 USF2 TRANSFAC yes 32278425
chr1 153936737 153936742 USF2 TRANSFAC yes 118372191
chr1 153936742 153936747 H4TF1 TRANSFAC yes 32278426
chr1 153936742 153936747 H4TF1 TRANSFAC yes 118372192
chr1 153936754 153936765 E2F4 JASPAR yes 32278427
chr1 153936754 153936765 E2F6 JASPAR yes 32278428
chr1 153936754 153936765 E2F4 JASPAR yes 118372193
chr1 153936754 153936765 E2F6 JASPAR yes 118372194
chr1 153936755 153936766 E2F1 JASPAR yes 32278429
chr1 153936755 153936766 E2F1 JASPAR yes 118372195
chr1 153936780 153936795 FOXA1 JASPAR yes 32278430
chr1 153936780 153936795 FOXA1 JASPAR yes 118372196
chr1 153936784 153936795 FOXA1 JASPAR yes 32278431
chr1 153936784 153936795 FOXA1 JASPAR yes 118372197
chr1 153936793 153936798 ETS2 TRANSFAC yes 32278432
chr1 153936793 153936798 ETS2 TRANSFAC yes 118372198
chr1 153936799 153936814 TFAP2A JASPAR yes 32278433
chr1 153936799 153936814 TFAP2A JASPAR yes 118372199
chr1 153936802 153936814 TFAP2A JASPAR yes 32278434
chr1 153936802 153936814 TFAP2B JASPAR yes 32278435
chr1 153936802 153936814 TFAP2C JASPAR yes 32278436
chr1 153936802 153936814 TFAP2A JASPAR yes 118372200
chr1 153936802 153936814 TFAP2B JASPAR yes 118372201
chr1 153936802 153936814 TFAP2C JASPAR yes 118372202
chr1 153936828 153936843 PRDM1 JASPAR yes 32278437
chr1 153936828 153936843 PRDM1 JASPAR yes 118372203
chr1 153936834 153936851 RXRA JASPAR yes 32278438
chr1 153936834 153936851 RXRA JASPAR yes 118372204
chr1 153936835 153936840 MYC TRANSFAC yes 32278439
chr1 153936835 153936840 MYC TRANSFAC yes 118372205
SNP sites on vista3364[chr1:153936554-153936861]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 153936589 rs72694268 T C
E2F1 POLR2A TFAP2C
637111
chr1 153936642 rs2275482 C A
E2F1 POLR2A TEAD3 TFAP2A TFAP2C
637112
chr1 153936761 rs377108359 C T
E2F1 E2F4 E2F6 POLR2A TFAP2A TFAP2C
637113
chr1 153936802 rs73010763 A G
E2F1 POLR2A TFAP2A TFAP2B TFAP2C
637114
Genes possibly regulated by vista3364[chr1:153936554-153936861]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153777201 153895451 - GATAD2B ENSG00000143614.7 153895451 0.61 1.0 1284 58897
chr1 153901977 153919172 - DENND4B ENSG00000198837.5 153919172 0.76 1.0 1285 82618
chr1 153920145 153931101 - CRTC2 ENSG00000160741.12 153931101 0.66 1.0 1286 94547
chr1 153931575 153940188 - SLC39A1 ENSG00000143570.13 153940188 0.65 0.99 1287 96673
chr1 153940010 153946839 + CREB3L4 ENSG00000143578.11 153940010 0.72 1.0 1288 96851
chr1 153946745 153950164 - JTB ENSG00000143543.10 153950164 0.52 0.99 1289 86697
chr1 153954127 153958834 - RAB13 ENSG00000143545.4 153958834 0.73 0.99 1290 78027
chr1 153963235 153964626 + RPS27 ENSG00000177954.7 153963235 0.77 0.96 1291 73626
Expression level of Genes
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miRNAs possibly regulated by vista3364[chr1:153936554-153936861]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results