EnhancerDB
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  3. vista3368[chr1:154166147-154166533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3368[chr1:154166147-154166533]
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Tissue distribution of vista3368
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Transcription factor that possibly regulate vista3368[chr1:154166147-154166533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154166150 154166162 BHLHE23 JASPAR yes 118372367
chr1 154166151 154166161 OLIG2 JASPAR yes 118372368
chr1 154166151 154166161 OLIG3 JASPAR yes 118372369
chr1 154166164 154166168 YY1 TRANSFAC yes 118372370
chr1 154166176 154166186 POU6F2 JASPAR yes 118372371
chr1 154166177 154166187 ALX3 JASPAR yes 118372372
chr1 154166177 154166187 EMX2 JASPAR yes 118372373
chr1 154166177 154166187 ESX1 JASPAR yes 118372374
chr1 154166177 154166187 GSX1 JASPAR yes 118372375
chr1 154166177 154166187 GSX2 JASPAR yes 118372376
chr1 154166177 154166187 HOXA2 JASPAR yes 118372377
chr1 154166177 154166187 HOXB2 JASPAR yes 118372378
chr1 154166177 154166187 HOXB3 JASPAR yes 118372379
chr1 154166177 154166187 LBX2 JASPAR yes 118372380
chr1 154166177 154166187 LHX2 JASPAR yes 118372381
chr1 154166177 154166187 LHX6 JASPAR yes 118372382
chr1 154166177 154166187 MEOX1 JASPAR yes 118372383
chr1 154166177 154166187 MEOX2 JASPAR yes 118372384
chr1 154166177 154166187 MIXL1 JASPAR yes 118372385
chr1 154166177 154166187 NOTO JASPAR yes 118372386
chr1 154166178 154166186 BSX JASPAR yes 118372387
chr1 154166178 154166186 DLX6 JASPAR yes 118372388
chr1 154166178 154166186 EN1 JASPAR yes 118372389
chr1 154166178 154166186 ISX JASPAR yes 118372390
chr1 154166178 154166186 LBX1 JASPAR yes 118372391
chr1 154166178 154166186 LHX9 JASPAR yes 118372392
chr1 154166178 154166186 LMX1A JASPAR yes 118372393
chr1 154166178 154166186 LMX1B JASPAR yes 118372394
chr1 154166178 154166186 NKX6-1 JASPAR yes 118372395
chr1 154166178 154166186 NKX6-2 JASPAR yes 118372396
chr1 154166178 154166186 PAX4 JASPAR yes 118372397
chr1 154166178 154166186 PDX1 JASPAR yes 118372398
chr1 154166178 154166186 PRRX1 JASPAR yes 118372399
chr1 154166178 154166186 RAX2 JASPAR yes 118372400
chr1 154166178 154166186 SHOX JASPAR yes 118372401
chr1 154166178 154166186 UNCX JASPAR yes 118372402
chr1 154166178 154166186 VAX1 JASPAR yes 118372403
chr1 154166178 154166186 VAX2 JASPAR yes 118372404
chr1 154166178 154166186 VSX1 JASPAR yes 118372405
chr1 154166178 154166186 VSX2 JASPAR yes 118372406
chr1 154166178 154166188 HOXB13 JASPAR yes 118372407
chr1 154166178 154166188 HOXD13 JASPAR yes 118372408
chr1 154166191 154166195 H1TF2 TRANSFAC yes 118372409
chr1 154166191 154166195 NFE TRANSFAC yes 118372410
chr1 154166191 154166195 SRF TRANSFAC yes 118372411
chr1 154166230 154166242 ZBTB7B JASPAR yes 118372412
chr1 154166236 154166240 ESR1 TRANSFAC yes 118372413
chr1 154166245 154166253 EHF JASPAR yes 118372414
chr1 154166247 154166252 ETS2 TRANSFAC yes 118372415
chr1 154166254 154166259 MYC TRANSFAC yes 118372416
chr1 154166258 154166264 TCF4 TRANSFAC yes 118372417
chr1 154166282 154166297 NFYB JASPAR yes 118372418
chr1 154166285 154166303 NFYA JASPAR yes 118372419
chr1 154166286 154166298 PBX1 JASPAR yes 118372420
chr1 154166289 154166293 H1TF2 TRANSFAC yes 118372421
chr1 154166289 154166293 NFE TRANSFAC yes 118372422
chr1 154166289 154166293 SRF TRANSFAC yes 118372423
chr1 154166310 154166316 YY1 JASPAR yes 118372424
chr1 154166321 154166329 EHF JASPAR yes 118372425
chr1 154166389 154166410 ZNF263 JASPAR yes 118372426
chr1 154166426 154166432 TCF4 TRANSFAC yes 118372427
chr1 154166429 154166440 NFE2L2 JASPAR yes 118372428
chr1 154166431 154166449 ESR2 JASPAR yes 118372429
chr1 154166432 154166449 ESR1 JASPAR yes 118372430
chr1 154166433 154166453 ESR1 JASPAR yes 118372431
chr1 154166448 154166461 ELF1 JASPAR yes 118372432
chr1 154166449 154166461 EHF JASPAR yes 118372433
chr1 154166449 154166461 ELF1 JASPAR yes 118372434
chr1 154166449 154166462 ELF3 JASPAR yes 118372435
chr1 154166450 154166461 ELF5 JASPAR yes 118372436
chr1 154166451 154166458 ETS1 TRANSFAC yes 118372437
chr1 154166476 154166486 ETV3 JASPAR yes 118372438
chr1 154166476 154166486 ETV5 JASPAR yes 118372439
chr1 154166476 154166487 SPDEF JASPAR yes 118372440
chr1 154166476 154166488 ELF1 JASPAR yes 118372441
chr1 154166477 154166486 ELK4 JASPAR yes 118372442
chr1 154166480 154166489 THAP1 JASPAR yes 118372443
chr1 154166483 154166487 LFA1 TRANSFAC yes 118372444
chr1 154166489 154166493 NFE TRANSFAC yes 118372445
chr1 154166504 154166516 GLI2 JASPAR yes 118372446
SNP sites on vista3368[chr1:154166147-154166533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154166214 rs557062636 G GA no 637596
chr1 154166377 rs150179300 T C no 637597
chr1 154166467 rs554548143 G T no 637598
chr1 154166484 rs149139449 G A,C
ELF1 ELK4 ETV3 ETV5 LFA1 SPDEF THAP1
637599
Genes possibly regulated by vista3368[chr1:154166147-154166533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 153965161 154127592 - NUP210L ENSG00000143552.5 154127592 0.79 0.95 1292 61445
chr1 154127784 154167124 - TPM3 ENSG00000143549.15 154167124 0.8 0.99 1293 99409
chr1 154171848 154178809 - C1orf189 ENSG00000163263.6 154178809 0.97 0.86 1294 87724
chr1 154179182 154193104 - C1orf43 ENSG00000143612.14 154193104 0.57 1.0 1295 73429
chr1 154192655 154243986 + UBAP2L ENSG00000143569.14 154192655 0.68 0.99 1296 73878
chr1 154244987 154248351 + HAX1 ENSG00000143575.10 154244987 0.48 0.99 1297 21546
Expression level of Genes
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miRNAs possibly regulated by vista3368[chr1:154166147-154166533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results