EnhancerDB
  1. Home
  2. Enhancers
  3. vista338[chr1:10804844-10805001]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista338[chr1:10804844-10805001]
Back to top
Tissue distribution of vista338
Back to top
Transcription factor that possibly regulate vista338[chr1:10804844-10805001]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10804860 10804872 PKNOX1 JASPAR yes 26741799
chr1 10804860 10804872 PKNOX2 JASPAR yes 26741800
chr1 10804860 10804872 TGIF1 JASPAR yes 26741801
chr1 10804860 10804872 TGIF2 JASPAR yes 26741802
chr1 10804860 10804872 PKNOX1 JASPAR yes 118229103
chr1 10804860 10804872 PKNOX2 JASPAR yes 118229104
chr1 10804860 10804872 TGIF1 JASPAR yes 118229105
chr1 10804860 10804872 TGIF2 JASPAR yes 118229106
chr1 10804861 10804871 MSC JASPAR yes 26741803
chr1 10804861 10804871 MSC JASPAR yes 118229107
chr1 10804869 10804879 MEF2A JASPAR yes 26741804
chr1 10804869 10804879 MEF2A JASPAR yes 118229108
chr1 10804870 10804874 YY1 TRANSFAC yes 26741805
chr1 10804870 10804874 YY1 TRANSFAC yes 118229109
chr1 10804881 10804894 SMAD2 JASPAR yes 26741806
chr1 10804881 10804894 SMAD2 JASPAR yes 118229110
chr1 10804902 10804917 JUND JASPAR yes 26741807
chr1 10804902 10804917 JUND JASPAR yes 118229111
chr1 10804903 10804911 NR4A2 JASPAR yes 26741808
chr1 10804903 10804911 NR4A2 JASPAR yes 118229112
chr1 10804903 10804916 JUN JASPAR yes 26741809
chr1 10804903 10804916 JUN JASPAR yes 118229113
chr1 10804904 10804912 CREB1 JASPAR yes 26741810
chr1 10804904 10804912 CREB1 JASPAR yes 118229114
chr1 10804913 10804924 FOXA1 JASPAR yes 26741811
chr1 10804913 10804924 FOXA1 JASPAR yes 118229115
chr1 10804913 10804928 FOXA1 JASPAR yes 26741812
chr1 10804913 10804928 FOXA1 JASPAR yes 118229116
chr1 10804940 10804960 TP63 JASPAR yes 26741813
chr1 10804940 10804960 TP63 JASPAR yes 118229117
chr1 10804941 10804959 TP53 JASPAR yes 26741814
chr1 10804941 10804959 TP53 JASPAR yes 118229118
chr1 10804960 10804971 USF2 JASPAR yes 26741815
chr1 10804960 10804971 USF2 JASPAR yes 118229119
chr1 10804961 10804971 MAX JASPAR yes 26741816
chr1 10804961 10804971 MAX JASPAR yes 118229120
chr1 10804976 10804982 ZNF354C JASPAR yes 26741817
chr1 10804976 10804982 ZNF354C JASPAR yes 118229121
chr1 10804978 10804998 RREB1 JASPAR yes 26741818
chr1 10804978 10804998 RREB1 JASPAR yes 118229122
chr1 10804982 10804986 H1TF2 TRANSFAC yes 26741819
chr1 10804982 10804986 NFE TRANSFAC yes 26741820
chr1 10804982 10804986 SRF TRANSFAC yes 26741821
chr1 10804982 10804986 H1TF2 TRANSFAC yes 118229123
chr1 10804982 10804986 NFE TRANSFAC yes 118229124
chr1 10804982 10804986 SRF TRANSFAC yes 118229125
chr1 10804986 10805000 GLIS3 JASPAR yes 26741822
chr1 10804986 10805000 GLIS3 JASPAR yes 118229126
chr1 10804998 10805013 RFX5 JASPAR yes 26741823
chr1 10804998 10805013 RFX5 JASPAR yes 118229127
SNP sites on vista338[chr1:10804844-10805001]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10804861 rs368925156 T C
MSC PKNOX1 PKNOX2 TGIF1 TGIF2
74561
chr1 10804947 rs146300746 G A
TP53 TP63
74562
chr1 10804954 rs115378280 C T
TP53 TP63
74563
chr1 10804964 rs564692244 A G
MAX USF2
74564
Genes possibly regulated by vista338[chr1:10804844-10805001]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10696661 10856707 - CASZ1 ENSG00000130940.10 10856707 0.83 1.0 141 48294
Expression level of Genes
Back to top
miRNAs possibly regulated by vista338[chr1:10804844-10805001]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results