EnhancerDB
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  3. vista3382[chr1:154577703-154577929]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3382[chr1:154577703-154577929]
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Tissue distribution of vista3382
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Transcription factor that possibly regulate vista3382[chr1:154577703-154577929]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154577712 154577718 NFIC JASPAR yes 118373245
chr1 154577714 154577718 H1TF2 TRANSFAC yes 118373246
chr1 154577714 154577718 NFE TRANSFAC yes 118373247
chr1 154577714 154577718 SRF TRANSFAC yes 118373248
chr1 154577730 154577741 E2F6 JASPAR yes 118373249
chr1 154577748 154577752 NFE TRANSFAC yes 118373250
chr1 154577749 154577760 TBX20 JASPAR yes 118373251
chr1 154577753 154577768 NR2C2 JASPAR yes 118373252
chr1 154577767 154577772 ETS2 TRANSFAC yes 118373253
chr1 154577810 154577823 SMAD2 JASPAR yes 118373254
chr1 154577815 154577823 TBX15 JASPAR yes 118373255
chr1 154577834 154577844 RELA JASPAR yes 118373256
chr1 154577834 154577844 REL JASPAR yes 118373257
chr1 154577834 154577845 NFKB1 JASPAR yes 118373258
chr1 154577840 154577847 SPIB JASPAR yes 118373259
chr1 154577840 154577861 ZNF263 JASPAR yes 118373260
chr1 154577858 154577876 MAFF JASPAR yes 118373261
chr1 154577865 154577880 SCRT1 JASPAR yes 118373262
chr1 154577866 154577876 FIGLA JASPAR yes 118373263
chr1 154577866 154577876 ID4 JASPAR yes 118373264
chr1 154577866 154577876 MSC JASPAR yes 118373265
chr1 154577866 154577876 MYF6 JASPAR yes 118373266
chr1 154577866 154577876 TCF3 JASPAR yes 118373267
chr1 154577866 154577876 TCF4 JASPAR yes 118373268
chr1 154577867 154577876 SNAI2 JASPAR yes 118373269
chr1 154577868 154577873 USF2 TRANSFAC yes 118373270
chr1 154577869 154577875 PTF TRANSFAC yes 118373271
chr1 154577869 154577884 MYBL2 JASPAR yes 118373272
chr1 154577880 154577884 YY1 TRANSFAC yes 118373273
chr1 154577883 154577898 PRDM1 JASPAR yes 118373274
chr1 154577886 154577897 E2F6 JASPAR yes 118373275
chr1 154577911 154577926 FOXP1 JASPAR yes 118373276
chr1 154577912 154577927 FOXP1 JASPAR yes 118373277
chr1 154577913 154577928 FOXP1 JASPAR yes 118373278
chr1 154577914 154577929 FOXP1 JASPAR yes 118373279
SNP sites on vista3382[chr1:154577703-154577929]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154577742 rs77586408 C A no 639336
chr1 154577759 rs552379567 T G
NR2C2 TBX20
639337
chr1 154577784 rs150028138 T C no 639338
chr1 154577876 rs34484012 T TA
FIGLA ID4 MAFF MSC MYBL2 MYF6 SCRT1 SNAI2 TCF3 TCF4
639339
chr1 154577876 rs397829084 T TA
FIGLA ID4 MAFF MSC MYBL2 MYF6 SCRT1 SNAI2 TCF3 TCF4
639340
chr1 154577876 rs869077092 T TA
FIGLA ID4 MAFF MSC MYBL2 MYF6 SCRT1 SNAI2 TCF3 TCF4
639341
chr1 154577895 rs144326449 C G
E2F6 PRDM1
639342
chr1 154577912 rs36008606 A AT
FOXP1
639343
chr1 154577912 rs397705536 A AT
FOXP1
639344
chr1 154577912 rs764233125 A AT,ATT
FOXP1
639345
Genes possibly regulated by vista3382[chr1:154577703-154577929]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154521053 154531504 - UBE2Q1 ENSG00000160714.5 154531504 0.75 1.0 1303 53801
chr1 154540257 154552502 + CHRNB2 ENSG00000160716.4 154540257 0.8 0.95 1304 62554
chr1 154554538 154600475 - ADAR ENSG00000160710.11 154600475 0.61 1.0 1305 77454
chr1 154585067 154585190 + AL606500.1 ENSG00000268141.1 154585067 0.0 0.0 1306 92862
Expression level of Genes
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miRNAs possibly regulated by vista3382[chr1:154577703-154577929]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results