EnhancerDB
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  3. vista3383[chr1:154579303-154579782]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3383[chr1:154579303-154579782]
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Tissue distribution of vista3383
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Transcription factor that possibly regulate vista3383[chr1:154579303-154579782]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154578993 154582294 POLR2A UCSC Txn Factor no Conserved 107833185
chr1 154578993 154582294 POLR2A UCSC Txn Factor no Conserved 107833186
chr1 154579327 154579343 ZNF143 JASPAR yes 118373280
chr1 154579336 154579347 FOXH1 JASPAR yes 118373281
chr1 154579346 154579354 TBX15 JASPAR yes 118373282
chr1 154579346 154579354 TBX1 JASPAR yes 118373283
chr1 154579346 154579354 TBX4 JASPAR yes 118373284
chr1 154579346 154579354 TBX5 JASPAR yes 118373285
chr1 154579346 154579358 PKNOX1 JASPAR yes 118373286
chr1 154579346 154579358 PKNOX2 JASPAR yes 118373287
chr1 154579347 154579357 ID4 JASPAR yes 118373288
chr1 154579347 154579357 MSC JASPAR yes 118373289
chr1 154579347 154579357 TCF3 JASPAR yes 118373290
chr1 154579348 154579357 SNAI2 JASPAR yes 118373291
chr1 154579349 154579354 USF2 TRANSFAC yes 118373292
chr1 154579358 154579364 HiNF-A TRANSFAC yes 118373293
chr1 154579368 154579373 ETS2 TRANSFAC yes 118373294
chr1 154579387 154579396 PITX3 JASPAR yes 118373295
chr1 154579387 154579397 GSC2 JASPAR yes 118373296
chr1 154579387 154579397 GSC JASPAR yes 118373297
chr1 154579388 154579396 OTX1 JASPAR yes 118373298
chr1 154579388 154579396 OTX2 JASPAR yes 118373299
chr1 154579396 154579402 TCF1 TRANSFAC yes 118373300
chr1 154579405 154579420 MEF2C JASPAR yes 118373301
chr1 154579408 154579423 FOXP1 JASPAR yes 118373302
chr1 154579409 154579424 FOXP1 JASPAR yes 118373303
chr1 154579410 154579416 TBP TRANSFAC yes 118373304
chr1 154579410 154579425 FOXP1 JASPAR yes 118373305
chr1 154579416 154579427 FOXC1 JASPAR yes 118373306
chr1 154579423 154579434 FOXB1 JASPAR yes 118373307
chr1 154579424 154579432 FOXL1 JASPAR yes 118373308
chr1 154579424 154579435 FOXB1 JASPAR yes 118373309
chr1 154579426 154579434 FOXL1 JASPAR yes 118373310
chr1 154579437 154579440 MYB TRANSFAC yes 118373311
chr1 154579443 154579454 RUNX1 JASPAR yes 118373312
chr1 154579453 154579457 TEAD2 TRANSFAC yes 118373313
chr1 154579476 154579481 GATA2 JASPAR yes 118373314
chr1 154579476 154579494 SRF JASPAR yes 118373315
chr1 154579477 154579491 TCF7L2 JASPAR yes 118373316
chr1 154579483 154579491 ISL2 JASPAR yes 118373317
chr1 154579490 154579494 TEAD2 TRANSFAC yes 118373318
chr1 154579490 154579495 TBP TRANSFAC yes 118373319
chr1 154579490 154579496 TMF TRANSFAC yes 118373320
chr1 154579532 154579550 NR3C1 JASPAR yes 118373321
chr1 154579538 154579542 YY1 TRANSFAC yes 118373322
chr1 154579544 154579548 YY1 TRANSFAC yes 118373323
chr1 154579573 154579585 PBX1 JASPAR yes 118373324
chr1 154579574 154579588 ONECUT1 JASPAR yes 118373325
chr1 154579574 154579588 ONECUT2 JASPAR yes 118373326
chr1 154579574 154579588 ONECUT3 JASPAR yes 118373327
chr1 154579577 154579587 PAX3 JASPAR yes 118373328
chr1 154579577 154579587 PAX7 JASPAR yes 118373329
chr1 154579587 154579603 ZNF143 JASPAR yes 118373330
chr1 154579602 154579617 RFX5 JASPAR yes 118373331
chr1 154579619 154579625 ZNF354C JASPAR yes 118373332
chr1 154579621 154579636 PRDM1 JASPAR yes 118373333
chr1 154579623 154579633 NFATC3 JASPAR yes 118373334
chr1 154579635 154579639 TEAD2 TRANSFAC yes 118373335
chr1 154579635 154579650 RUNX2 JASPAR yes 118373336
chr1 154579637 154579640 MYB TRANSFAC yes 118373337
chr1 154579638 154579649 RUNX1 JASPAR yes 118373338
chr1 154579639 154579649 RUNX3 JASPAR yes 118373339
chr1 154579640 154579649 RUNX2 JASPAR yes 118373340
chr1 154579642 154579657 STAT2 JASPAR yes 118373341
chr1 154579651 154579661 NFATC3 JASPAR yes 118373342
chr1 154579652 154579659 NFATC2 JASPAR yes 118373343
chr1 154579652 154579663 STAT3 JASPAR yes 118373344
chr1 154579654 154579667 HSF2 JASPAR yes 118373345
chr1 154579667 154579671 TEAD2 TRANSFAC yes 118373346
chr1 154579667 154579672 TBP TRANSFAC yes 118373347
chr1 154579667 154579673 TMF TRANSFAC yes 118373348
chr1 154579677 154579693 POU4F2 JASPAR yes 118373349
chr1 154579677 154579693 POU4F3 JASPAR yes 118373350
chr1 154579679 154579693 POU4F1 JASPAR yes 118373351
chr1 154579681 154579697 SOX8 JASPAR yes 118373352
chr1 154579714 154579726 POU3F1 JASPAR yes 118373353
chr1 154579714 154579726 POU3F2 JASPAR yes 118373354
chr1 154579716 154579725 POU3F4 JASPAR yes 118373355
chr1 154579723 154579726 MYB TRANSFAC yes 118373356
chr1 154579741 154579759 TP63 JASPAR yes 118373357
chr1 154579741 154579759 TP73 JASPAR yes 118373358
chr1 154579743 154579758 TP53 JASPAR yes 118373359
chr1 154579757 154579760 MYB TRANSFAC yes 118373360
chr1 154579763 154579767 YY1 TRANSFAC yes 118373361
chr1 154579763 154579774 ELF5 JASPAR yes 118373362
chr1 154579763 154579774 ETV2 JASPAR yes 118373363
chr1 154579764 154579772 FEV JASPAR yes 118373364
chr1 154579766 154579773 SPIB JASPAR yes 118373365
SNP sites on vista3383[chr1:154579303-154579782]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154579303 rs541859884 T A,C
POLR2A
639363
chr1 154579366 rs140789988 C A
POLR2A
639364
chr1 154579489 rs145913485 TG T
ISL2 POLR2A SRF TCF7L2
639365
chr1 154579515 rs185952792 C T
POLR2A
639366
chr1 154579534 rs1007839 T C
NR3C1 POLR2A
639367
chr1 154579536 rs6669764 G C
NR3C1 POLR2A
639368
chr1 154579585 rs12059682 T C
ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7 PBX1 POLR2A
639369
chr1 154579609 rs190727504 G C
POLR2A RFX5
639370
chr1 154579634 rs12128435 C G
POLR2A PRDM1
639371
chr1 154579702 rs543248660 G A,T
POLR2A
639372
Genes possibly regulated by vista3383[chr1:154579303-154579782]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154521053 154531504 - UBE2Q1 ENSG00000160714.5 154531504 0.75 1.0 1303 52201
chr1 154540257 154552502 + CHRNB2 ENSG00000160716.4 154540257 0.8 0.95 1304 60954
chr1 154554538 154600475 - ADAR ENSG00000160710.11 154600475 0.61 1.0 1305 79307
chr1 154585067 154585190 + AL606500.1 ENSG00000268141.1 154585067 0.0 0.0 1306 94715
Expression level of Genes
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miRNAs possibly regulated by vista3383[chr1:154579303-154579782]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results