EnhancerDB
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  3. vista3384[chr1:154582047-154582244]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3384[chr1:154582047-154582244]
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Tissue distribution of vista3384
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Transcription factor that possibly regulate vista3384[chr1:154582047-154582244]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154578993 154582294 POLR2A UCSC Txn Factor no Conserved 107833185
chr1 154578993 154582294 POLR2A UCSC Txn Factor no Conserved 107833186
chr1 154581983 154582242 RUNX3 UCSC Txn Factor no Conserved 107833208
chr1 154582057 154582068 HOXC13 JASPAR yes 118373366
chr1 154582075 154582081 MZF1 JASPAR yes 118373367
chr1 154582079 154582093 ZIC1 JASPAR yes 118373368
chr1 154582086 154582107 ZNF263 JASPAR yes 118373369
chr1 154582087 154582097 MZF1 JASPAR yes 118373370
chr1 154582090 154582111 ZNF263 JASPAR yes 118373371
chr1 154582095 154582105 SP1 JASPAR yes 118373372
chr1 154582095 154582116 ZNF263 JASPAR yes 118373373
chr1 154582096 154582103 CEBPA TRANSFAC yes 118373374
chr1 154582098 154582108 MZF1 JASPAR yes 118373375
chr1 154582105 154582117 NHLH1 JASPAR yes 118373376
chr1 154582106 154582115 SNAI2 JASPAR yes 118373377
chr1 154582106 154582116 ID4 JASPAR yes 118373378
chr1 154582106 154582116 NHLH1 JASPAR yes 118373379
chr1 154582106 154582116 TCF3 JASPAR yes 118373380
chr1 154582106 154582116 TCF4 JASPAR yes 118373381
chr1 154582111 154582130 REST JASPAR yes 118373382
chr1 154582113 154582128 RUNX2 JASPAR yes 118373383
chr1 154582116 154582127 RUNX1 JASPAR yes 118373384
chr1 154582117 154582127 RUNX3 JASPAR yes 118373385
chr1 154582118 154582127 RUNX2 JASPAR yes 118373386
chr1 154582150 154582162 E2F1 JASPAR yes 118373387
chr1 154582156 154582173 ZNF410 JASPAR yes 118373388
chr1 154582158 154582168 MZF1 JASPAR yes 118373389
chr1 154582158 154582176 SRF JASPAR yes 118373390
chr1 154582170 154582174 LFA1 TRANSFAC yes 118373391
chr1 154582194 154582199 SP1 TRANSFAC yes 118373392
chr1 154582206 154582216 BARHL2 JASPAR yes 118373393
chr1 154582208 154582212 YY1 TRANSFAC yes 118373394
chr1 154582212 154582215 MYB TRANSFAC yes 118373395
chr1 154582231 154582241 POU6F2 JASPAR yes 118373396
chr1 154582232 154582242 EMX2 JASPAR yes 118373397
chr1 154582232 154582242 EVX1 JASPAR yes 118373398
chr1 154582232 154582242 EVX2 JASPAR yes 118373399
chr1 154582232 154582242 LHX2 JASPAR yes 118373400
chr1 154582232 154582242 MEOX1 JASPAR yes 118373401
chr1 154582232 154582242 NOTO JASPAR yes 118373402
chr1 154582233 154582241 LBX1 JASPAR yes 118373403
chr1 154582233 154582241 PDX1 JASPAR yes 118373404
chr1 154582233 154582241 VAX1 JASPAR yes 118373405
chr1 154582233 154582241 VAX2 JASPAR yes 118373406
chr1 154582233 154582241 VSX1 JASPAR yes 118373407
chr1 154582233 154582241 VSX2 JASPAR yes 118373408
SNP sites on vista3384[chr1:154582047-154582244]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154582129 rs12125166 C T
POLR2A REST RUNX3
639405
Genes possibly regulated by vista3384[chr1:154582047-154582244]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154521053 154531504 - UBE2Q1 ENSG00000160714.5 154531504 0.75 1.0 1303 49457
chr1 154540257 154552502 + CHRNB2 ENSG00000160716.4 154540257 0.8 0.95 1304 58210
chr1 154554538 154600475 - ADAR ENSG00000160710.11 154600475 0.61 1.0 1305 81769
chr1 154585067 154585190 + AL606500.1 ENSG00000268141.1 154585067 0.0 0.0 1306 97177
Expression level of Genes
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miRNAs possibly regulated by vista3384[chr1:154582047-154582244]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results