EnhancerDB
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  3. vista3390[chr1:154720589-154720696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3390[chr1:154720589-154720696]
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Tissue distribution of vista3390
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Transcription factor that possibly regulate vista3390[chr1:154720589-154720696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154720562 154720856 RUNX3 UCSC Txn Factor no Conserved 107833251
chr1 154720604 154720619 PRDM1 JASPAR yes 32306872
chr1 154720604 154720619 PRDM1 JASPAR yes 118373562
chr1 154720604 154720624 PPARG JASPAR yes 32306873
chr1 154720604 154720624 PPARG JASPAR yes 118373563
chr1 154720605 154720615 MZF1 JASPAR yes 32306874
chr1 154720605 154720615 MZF1 JASPAR yes 118373564
chr1 154720615 154720623 ATF2 TRANSFAC yes 32306875
chr1 154720615 154720623 ATF2 TRANSFAC yes 118373565
chr1 154720616 154720621 ATF1 TRANSFAC yes 32306876
chr1 154720616 154720621 ATF1 TRANSFAC yes 118373566
chr1 154720616 154720630 RXRG JASPAR yes 32306877
chr1 154720616 154720630 RXRG JASPAR yes 118373567
chr1 154720640 154720654 ZIC1 JASPAR yes 32306878
chr1 154720640 154720654 ZIC1 JASPAR yes 118373568
chr1 154720640 154720655 ZIC3 JASPAR yes 32306879
chr1 154720640 154720655 ZIC4 JASPAR yes 32306880
chr1 154720640 154720655 ZIC3 JASPAR yes 118373569
chr1 154720640 154720655 ZIC4 JASPAR yes 118373570
chr1 154720657 154720678 IRF1 JASPAR yes 32306881
chr1 154720657 154720678 IRF1 JASPAR yes 118373571
chr1 154720661 154720675 IRF8 JASPAR yes 32306882
chr1 154720661 154720675 IRF8 JASPAR yes 118373572
chr1 154720693 154720712 REST JASPAR yes 32306883
chr1 154720693 154720712 REST JASPAR yes 118373573
SNP sites on vista3390[chr1:154720589-154720696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3390[chr1:154720589-154720696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3390[chr1:154720589-154720696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results