EnhancerDB
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  3. vista340[chr1:10816030-10816223]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista340[chr1:10816030-10816223]
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Tissue distribution of vista340
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Transcription factor that possibly regulate vista340[chr1:10816030-10816223]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10816042 10816047 SP1 TRANSFAC yes 26743329
chr1 10816042 10816047 SP1 TRANSFAC yes 118229221
chr1 10816045 10816051 ETS1 JASPAR yes 26743330
chr1 10816045 10816051 ETS1 JASPAR yes 118229222
chr1 10816077 10816091 MTF1 JASPAR yes 26743331
chr1 10816077 10816091 MTF1 JASPAR yes 118229223
chr1 10816086 10816097 E2F6 JASPAR yes 26743332
chr1 10816086 10816097 E2F6 JASPAR yes 118229224
chr1 10816103 10816113 SP1 JASPAR yes 26743333
chr1 10816103 10816113 SP1 JASPAR yes 118229225
chr1 10816104 10816119 TFAP2A JASPAR yes 26743334
chr1 10816104 10816119 TFAP2C JASPAR yes 26743335
chr1 10816104 10816119 TFAP2A JASPAR yes 118229226
chr1 10816104 10816119 TFAP2C JASPAR yes 118229227
chr1 10816107 10816118 EBF1 JASPAR yes 26743336
chr1 10816107 10816118 EBF1 JASPAR yes 118229228
chr1 10816107 10816119 TFAP2A JASPAR yes 26743337
chr1 10816107 10816119 TFAP2B JASPAR yes 26743338
chr1 10816107 10816119 TFAP2C JASPAR yes 26743339
chr1 10816107 10816119 TFAP2A JASPAR yes 118229229
chr1 10816107 10816119 TFAP2B JASPAR yes 118229230
chr1 10816107 10816119 TFAP2C JASPAR yes 118229231
chr1 10816109 10816118 TFAP2A JASPAR yes 26743340
chr1 10816109 10816118 TFAP2A JASPAR yes 118229232
chr1 10816146 10816151 SP1 TRANSFAC yes 26743341
chr1 10816146 10816151 SP1 TRANSFAC yes 118229233
chr1 10816150 10816157 ETS1 TRANSFAC yes 26743342
chr1 10816150 10816157 ETS1 TRANSFAC yes 118229234
chr1 10816150 10816160 GABPA JASPAR yes 26743343
chr1 10816150 10816160 GABPA JASPAR yes 118229235
chr1 10816155 10816170 ESR2 JASPAR yes 26743344
chr1 10816155 10816170 ESR2 JASPAR yes 118229236
chr1 10816159 10816172 SMAD2 JASPAR yes 26743345
chr1 10816159 10816172 SMAD2 JASPAR yes 118229237
chr1 10816166 10816182 GLIS1 JASPAR yes 26743346
chr1 10816166 10816182 GLIS1 JASPAR yes 118229238
chr1 10816168 10816173 SP1 TRANSFAC yes 26743347
chr1 10816168 10816173 SP1 TRANSFAC yes 118229239
chr1 10816191 10816203 TAL1 JASPAR yes 26743348
chr1 10816191 10816203 TAL1 JASPAR yes 118229240
chr1 10816193 10816203 FIGLA JASPAR yes 26743349
chr1 10816193 10816203 MSC JASPAR yes 26743350
chr1 10816193 10816203 TFAP4 JASPAR yes 26743351
chr1 10816193 10816203 FIGLA JASPAR yes 118229241
chr1 10816193 10816203 MSC JASPAR yes 118229242
chr1 10816193 10816203 TFAP4 JASPAR yes 118229243
chr1 10816193 10816205 TAL1 JASPAR yes 26743352
chr1 10816193 10816205 TAL1 JASPAR yes 118229244
chr1 10816207 10816220 NFKB2 JASPAR yes 26743353
chr1 10816207 10816220 NFKB2 JASPAR yes 118229245
chr1 10816208 10816219 NFKB1 JASPAR yes 26743354
chr1 10816208 10816219 NFKB1 JASPAR yes 118229246
chr1 10816209 10816219 NFKB1 JASPAR yes 26743355
chr1 10816209 10816219 NFKB1 JASPAR yes 118229247
chr1 10816215 10816235 RREB1 JASPAR yes 26743356
chr1 10816215 10816235 RREB1 JASPAR yes 118229248
SNP sites on vista340[chr1:10816030-10816223]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10816071 rs144910105 G A no 74719
chr1 10816075 rs141103488 A C no 74720
chr1 10816087 rs146712403 G A
E2F6 MTF1
74721
chr1 10816193 rs77674854 C T
FIGLA MSC TAL1 TFAP4
74722
chr1 10816217 rs6688219 C T
NFKB1 NFKB2 RREB1
74723
Genes possibly regulated by vista340[chr1:10816030-10816223]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10696661 10856707 - CASZ1 ENSG00000130940.10 10856707 0.83 1.0 141 59516
Expression level of Genes
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miRNAs possibly regulated by vista340[chr1:10816030-10816223]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results