EnhancerDB
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  3. vista3400[chr1:154821633-154821959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3400[chr1:154821633-154821959]
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Tissue distribution of vista3400
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Transcription factor that possibly regulate vista3400[chr1:154821633-154821959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154821634 154821646 INSM1 JASPAR yes 32318444
chr1 154821634 154821646 INSM1 JASPAR yes 118374118
chr1 154821638 154821653 STAT1 JASPAR yes 32318445
chr1 154821638 154821653 STAT1 JASPAR yes 118374119
chr1 154821640 154821651 STAT1 JASPAR yes 32318446
chr1 154821640 154821651 STAT3 JASPAR yes 32318447
chr1 154821640 154821651 STAT1 JASPAR yes 118374120
chr1 154821640 154821651 STAT3 JASPAR yes 118374121
chr1 154821644 154821652 FEV JASPAR yes 32318448
chr1 154821644 154821652 FEV JASPAR yes 118374122
chr1 154821669 154821673 NFE TRANSFAC yes 32318449
chr1 154821669 154821673 NFE TRANSFAC yes 118374123
chr1 154821669 154821682 SMAD2 JASPAR yes 32318450
chr1 154821669 154821682 SMAD2 JASPAR yes 118374124
chr1 154821707 154821711 YY1 TRANSFAC yes 32318451
chr1 154821707 154821711 YY1 TRANSFAC yes 118374125
chr1 154821717 154821727 TEAD1 JASPAR yes 32318452
chr1 154821717 154821727 TEAD4 JASPAR yes 32318453
chr1 154821717 154821727 TEAD1 JASPAR yes 118374126
chr1 154821717 154821727 TEAD4 JASPAR yes 118374127
chr1 154821718 154821729 DUX4 JASPAR yes 32318454
chr1 154821718 154821729 DUX4 JASPAR yes 118374128
chr1 154821729 154821735 MZF1 JASPAR yes 32318455
chr1 154821729 154821735 MZF1 JASPAR yes 118374129
chr1 154821739 154821757 ESR1 JASPAR yes 32318456
chr1 154821739 154821757 ESR1 JASPAR yes 118374130
chr1 154821747 154821762 SCRT1 JASPAR yes 32318457
chr1 154821747 154821762 SCRT1 JASPAR yes 118374131
chr1 154821748 154821758 FIGLA JASPAR yes 32318458
chr1 154821748 154821758 MSC JASPAR yes 32318459
chr1 154821748 154821758 FIGLA JASPAR yes 118374132
chr1 154821748 154821758 MSC JASPAR yes 118374133
chr1 154821749 154821758 SNAI2 JASPAR yes 32318460
chr1 154821749 154821758 SNAI2 JASPAR yes 118374134
chr1 154821750 154821755 USF2 TRANSFAC yes 32318461
chr1 154821750 154821755 USF2 TRANSFAC yes 118374135
chr1 154821751 154821757 PTF TRANSFAC yes 32318462
chr1 154821751 154821757 PTF TRANSFAC yes 118374136
chr1 154821755 154821766 STAT1 JASPAR yes 32318463
chr1 154821755 154821766 STAT1 JASPAR yes 118374137
chr1 154821759 154821764 ETS2 TRANSFAC yes 32318464
chr1 154821759 154821764 ETS2 TRANSFAC yes 118374138
chr1 154821763 154821769 HiNF-A TRANSFAC yes 32318465
chr1 154821763 154821769 HiNF-A TRANSFAC yes 118374139
chr1 154821776 154821796 TP63 JASPAR yes 32318466
chr1 154821776 154821796 TP63 JASPAR yes 118374140
chr1 154821777 154821795 TP63 JASPAR yes 32318467
chr1 154821777 154821795 TP63 JASPAR yes 118374141
chr1 154821779 154821791 YY1 JASPAR yes 32318468
chr1 154821779 154821791 YY1 JASPAR yes 118374142
chr1 154821805 154821815 NEUROD2 JASPAR yes 32318469
chr1 154821805 154821815 NEUROD2 JASPAR yes 118374143
chr1 154821805 154821816 USF1 JASPAR yes 32318470
chr1 154821805 154821816 USF2 JASPAR yes 32318471
chr1 154821805 154821816 USF1 JASPAR yes 118374144
chr1 154821805 154821816 USF2 JASPAR yes 118374145
chr1 154821806 154821816 MAX JASPAR yes 32318472
chr1 154821806 154821816 MAX JASPAR yes 118374146
chr1 154821818 154821833 NFYB JASPAR yes 32318473
chr1 154821818 154821833 NFYB JASPAR yes 118374147
chr1 154821820 154821834 PLAG1 JASPAR yes 32318474
chr1 154821820 154821834 PLAG1 JASPAR yes 118374148
chr1 154821820 154821836 NFYA JASPAR yes 32318475
chr1 154821820 154821836 NFYA JASPAR yes 118374149
chr1 154821821 154821826 SP1 TRANSFAC yes 32318476
chr1 154821821 154821826 SP1 TRANSFAC yes 118374150
chr1 154821821 154821835 PLAG1 JASPAR yes 32318477
chr1 154821821 154821835 PLAG1 JASPAR yes 118374151
chr1 154821821 154821839 NFYA JASPAR yes 32318478
chr1 154821821 154821839 NFYA JASPAR yes 118374152
chr1 154821823 154821838 ZIC4 JASPAR yes 32318479
chr1 154821823 154821838 ZIC4 JASPAR yes 118374153
chr1 154821825 154821829 H1TF2 TRANSFAC yes 32318480
chr1 154821825 154821829 NFE TRANSFAC yes 32318481
chr1 154821825 154821829 SRF TRANSFAC yes 32318482
chr1 154821825 154821829 H1TF2 TRANSFAC yes 118374154
chr1 154821825 154821829 NFE TRANSFAC yes 118374155
chr1 154821825 154821829 SRF TRANSFAC yes 118374156
chr1 154821831 154821846 RFX5 JASPAR yes 32318483
chr1 154821831 154821846 RFX5 JASPAR yes 118374157
chr1 154821840 154821844 LFA1 TRANSFAC yes 32318484
chr1 154821840 154821844 LFA1 TRANSFAC yes 118374158
chr1 154821847 154821860 TFAP2B JASPAR yes 32318485
chr1 154821847 154821860 TFAP2C JASPAR yes 32318486
chr1 154821847 154821860 TFAP2B JASPAR yes 118374159
chr1 154821847 154821860 TFAP2C JASPAR yes 118374160
chr1 154821848 154821860 TFAP2A JASPAR yes 32318487
chr1 154821848 154821860 TFAP2B JASPAR yes 32318488
chr1 154821848 154821860 TFAP2C JASPAR yes 32318489
chr1 154821848 154821860 TFAP2A JASPAR yes 118374161
chr1 154821848 154821860 TFAP2B JASPAR yes 118374162
chr1 154821848 154821860 TFAP2C JASPAR yes 118374163
chr1 154821878 154821896 NFYA JASPAR yes 32318490
chr1 154821878 154821896 NFYA JASPAR yes 118374164
chr1 154821886 154821891 NFY TRANSFAC yes 32318491
chr1 154821886 154821891 NFY TRANSFAC yes 118374165
chr1 154821888 154821902 TLX1 JASPAR yes 32318492
chr1 154821888 154821902 TLX1 JASPAR yes 118374166
chr1 154821915 154821933 MAFF JASPAR yes 32318493
chr1 154821915 154821933 MAFF JASPAR yes 118374167
chr1 154821917 154821929 PKNOX1 JASPAR yes 32318494
chr1 154821917 154821929 PKNOX2 JASPAR yes 32318495
chr1 154821917 154821929 PKNOX1 JASPAR yes 118374168
chr1 154821917 154821929 PKNOX2 JASPAR yes 118374169
chr1 154821917 154821938 MAFG JASPAR yes 32318496
chr1 154821917 154821938 MAFG JASPAR yes 118374170
chr1 154821918 154821928 TFAP4 JASPAR yes 32318497
chr1 154821918 154821928 TFAP4 JASPAR yes 118374171
chr1 154821922 154821940 MAFF JASPAR yes 32318498
chr1 154821922 154821940 MAFF JASPAR yes 118374172
chr1 154821923 154821934 NFE2L2 JASPAR yes 32318499
chr1 154821923 154821934 NFE2L2 JASPAR yes 118374173
chr1 154821938 154821951 ELF3 JASPAR yes 32318500
chr1 154821938 154821951 ELF3 JASPAR yes 118374174
chr1 154821939 154821950 SPDEF JASPAR yes 32318501
chr1 154821939 154821950 SPDEF JASPAR yes 118374175
chr1 154821955 154821966 FOXH1 JASPAR yes 32318502
chr1 154821955 154821966 FOXH1 JASPAR yes 118374176
SNP sites on vista3400[chr1:154821633-154821959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154821789 rs142976741 G A
TP63 YY1
641380
chr1 154821814 rs12040513 G A
MAX NEUROD2 USF1 USF2
641381
chr1 154821854 rs191149594 C A
TFAP2A TFAP2B TFAP2C
641382
chr1 154821874 rs10157951 G A no 641383
Genes possibly regulated by vista3400[chr1:154821633-154821959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154669931 154842756 - KCNN3 ENSG00000143603.14 154842756 0.92 0.9 1307 79203
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 0.58 1.0 1308 12492
Expression level of Genes
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miRNAs possibly regulated by vista3400[chr1:154821633-154821959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results