EnhancerDB
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  3. vista34040[chr2:187390995-187391341]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34040[chr2:187390995-187391341]
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Tissue distribution of vista34040
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Transcription factor that possibly regulate vista34040[chr2:187390995-187391341]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 187390996 187391011 RFX5 JASPAR yes 22176292
chr2 187390999 187391008 NFIX JASPAR yes 22176293
chr2 187391000 187391006 NFIC JASPAR yes 22176294
chr2 187391015 187391020 GATA2 JASPAR yes 22176295
chr2 187391059 187391069 RORA JASPAR yes 22176296
chr2 187391064 187391068 ESR1 TRANSFAC yes 22176297
chr2 187391067 187391087 TP53 JASPAR yes 22176298
chr2 187391079 187391083 LFA1 TRANSFAC yes 22176299
chr2 187391094 187391111 BCL6B JASPAR yes 22176300
chr2 187391103 187391115 MEF2D JASPAR yes 22176301
chr2 187391105 187391119 FOXF2 JASPAR yes 22176302
chr2 187391105 187391120 FOXP1 JASPAR yes 22176303
chr2 187391106 187391117 FOXA1 JASPAR yes 22176304
chr2 187391106 187391121 FOXA1 JASPAR yes 22176305
chr2 187391107 187391118 FOXB1 JASPAR yes 22176306
chr2 187391107 187391118 FOXC1 JASPAR yes 22176307
chr2 187391107 187391119 FOXC2 JASPAR yes 22176308
chr2 187391108 187391119 FOXP2 JASPAR yes 22176309
chr2 187391108 187391120 FOXI1 JASPAR yes 22176310
chr2 187391110 187391118 FOXG1 JASPAR yes 22176311
chr2 187391110 187391118 FOXO3 JASPAR yes 22176312
chr2 187391130 187391134 YY1 TRANSFAC yes 22176313
chr2 187391136 187391140 H4TF2 TRANSFAC yes 22176314
chr2 187391169 187391179 BARHL2 JASPAR yes 22176315
chr2 187391187 187391201 PAX6 JASPAR yes 22176316
chr2 187391202 187391214 TEAD1 JASPAR yes 22176317
chr2 187391229 187391238 ZEB1 JASPAR yes 22176318
chr2 187391254 187391269 HSF1 JASPAR yes 22176319
chr2 187391255 187391268 HSF1 JASPAR yes 22176320
chr2 187391255 187391268 HSF4 JASPAR yes 22176321
chr2 187391281 187391294 HSF1 JASPAR yes 22176322
chr2 187391281 187391294 HSF2 JASPAR yes 22176323
chr2 187391281 187391294 HSF4 JASPAR yes 22176324
chr2 187391302 187391305 MYB TRANSFAC yes 22176325
chr2 187391318 187391330 FOXI1 JASPAR yes 22176326
chr2 187391319 187391330 FOXP2 JASPAR yes 22176327
chr2 187391320 187391328 FOXG1 JASPAR yes 22176328
chr2 187391321 187391331 HOXA13 JASPAR yes 22176329
chr2 187391321 187391331 HOXB13 JASPAR yes 22176330
chr2 187391329 187391333 LFA1 TRANSFAC yes 22176331
SNP sites on vista34040[chr2:187390995-187391341]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 187391142 rs78702880 C A no 6241676
chr2 187391173 rs552453895 G A
BARHL2
6241677
chr2 187391206 rs10192370 A G
TEAD1
6241678
chr2 187391282 rs73040044 A C
HSF1 HSF2 HSF4
6241679
chr2 187391314 rs145314236 G A no 6241680
Genes possibly regulated by vista34040[chr2:187390995-187391341]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 187350883 187374090 + ZC3H15 ENSG00000065548.13 187350883 0.63 0.98 2977 59888
chr2 187361840 187365393 + AC018867.1 ENSG00000213953.1 187361840 0.0 0.0 2978 70845
chr2 187367219 187367356 - AC018867.2 ENSG00000268846.1 187367356 0.93 1.0 2979 76361
chr2 187454792 187545628 + ITGAV ENSG00000138448.7 187454792 0.58 0.98 2980 36549
Expression level of Genes
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miRNAs possibly regulated by vista34040[chr2:187390995-187391341]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results