EnhancerDB
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  3. vista3405[chr1:154957258-154957622]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3405[chr1:154957258-154957622]
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Tissue distribution of vista3405
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Transcription factor that possibly regulate vista3405[chr1:154957258-154957622]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 154957267 154957272 ETS2 TRANSFAC yes 118374408
chr1 154957267 154957275 EHF JASPAR yes 118374409
chr1 154957269 154957284 HSF1 JASPAR yes 118374410
chr1 154957270 154957283 HSF1 JASPAR yes 118374411
chr1 154957270 154957283 HSF2 JASPAR yes 118374412
chr1 154957270 154957283 HSF4 JASPAR yes 118374413
chr1 154957284 154957297 NFKB1 JASPAR yes 118374414
chr1 154957292 154957298 SP1 TRANSFAC yes 118374415
chr1 154957329 154957332 MYB TRANSFAC yes 118374416
chr1 154957329 154957341 PKNOX1 JASPAR yes 118374417
chr1 154957329 154957341 PKNOX2 JASPAR yes 118374418
chr1 154957329 154957341 TGIF1 JASPAR yes 118374419
chr1 154957329 154957341 TGIF2 JASPAR yes 118374420
chr1 154957346 154957360 IRF7 JASPAR yes 118374421
chr1 154957348 154957354 TCF4 TRANSFAC yes 118374422
chr1 154957370 154957381 NFE2L2 JASPAR yes 118374423
chr1 154957374 154957378 NFE TRANSFAC yes 118374424
chr1 154957397 154957412 RFX5 JASPAR yes 118374425
chr1 154957404 154957423 PAX5 JASPAR yes 118374426
chr1 154957420 154957432 YY1 JASPAR yes 118374427
chr1 154957432 154957450 ESR2 JASPAR yes 118374428
chr1 154957444 154957465 MAFG JASPAR yes 118374429
chr1 154957456 154957469 ZBTB18 JASPAR yes 118374430
chr1 154957462 154957481 RFX2 JASPAR yes 118374431
chr1 154957466 154957482 RFX2 JASPAR yes 118374432
chr1 154957466 154957482 RFX3 JASPAR yes 118374433
chr1 154957466 154957482 RFX4 JASPAR yes 118374434
chr1 154957466 154957482 RFX5 JASPAR yes 118374435
chr1 154957478 154957487 SNAI2 JASPAR yes 118374436
chr1 154957478 154957488 FIGLA JASPAR yes 118374437
chr1 154957478 154957488 ID4 JASPAR yes 118374438
chr1 154957478 154957488 MSC JASPAR yes 118374439
chr1 154957478 154957488 TCF3 JASPAR yes 118374440
chr1 154957478 154957488 TCF4 JASPAR yes 118374441
chr1 154957481 154957489 MGA JASPAR yes 118374442
chr1 154957481 154957489 TBX15 JASPAR yes 118374443
chr1 154957481 154957489 TBX1 JASPAR yes 118374444
chr1 154957481 154957489 TBX4 JASPAR yes 118374445
chr1 154957481 154957489 TBX5 JASPAR yes 118374446
chr1 154957492 154957511 PAX5 JASPAR yes 118374447
chr1 154957493 154957501 TBX5 JASPAR yes 118374448
chr1 154957493 154957502 ZEB1 JASPAR yes 118374449
chr1 154957493 154957506 ZBTB18 JASPAR yes 118374450
chr1 154957494 154957504 ID4 JASPAR yes 118374451
chr1 154957494 154957504 TCF3 JASPAR yes 118374452
chr1 154957494 154957504 TCF4 JASPAR yes 118374453
chr1 154957496 154957501 USF2 TRANSFAC yes 118374454
chr1 154957501 154957522 IRF1 JASPAR yes 118374455
chr1 154957502 154957523 IRF1 JASPAR yes 118374456
chr1 154957504 154957525 IRF1 JASPAR yes 118374457
chr1 154957505 154957526 IRF1 JASPAR yes 118374458
chr1 154957506 154957521 FOXP1 JASPAR yes 118374459
chr1 154957506 154957527 IRF1 JASPAR yes 118374460
chr1 154957507 154957522 FOXP1 JASPAR yes 118374461
chr1 154957507 154957528 IRF1 JASPAR yes 118374462
chr1 154957508 154957523 FOXP1 JASPAR yes 118374463
chr1 154957508 154957529 IRF1 JASPAR yes 118374464
chr1 154957509 154957524 FOXP1 JASPAR yes 118374465
chr1 154957509 154957530 IRF1 JASPAR yes 118374466
chr1 154957510 154957525 FOXP1 JASPAR yes 118374467
chr1 154957510 154957531 IRF1 JASPAR yes 118374468
chr1 154957511 154957526 FOXP1 JASPAR yes 118374469
chr1 154957511 154957532 IRF1 JASPAR yes 118374470
chr1 154957512 154957527 FOXP1 JASPAR yes 118374471
chr1 154957512 154957533 IRF1 JASPAR yes 118374472
chr1 154957513 154957528 FOXP1 JASPAR yes 118374473
chr1 154957513 154957534 IRF1 JASPAR yes 118374474
chr1 154957514 154957529 FOXP1 JASPAR yes 118374475
chr1 154957514 154957535 IRF1 JASPAR yes 118374476
chr1 154957515 154957530 FOXP1 JASPAR yes 118374477
chr1 154957515 154957536 IRF1 JASPAR yes 118374478
chr1 154957516 154957531 FOXP1 JASPAR yes 118374479
chr1 154957516 154957537 IRF1 JASPAR yes 118374480
chr1 154957517 154957532 FOXP1 JASPAR yes 118374481
chr1 154957517 154957538 IRF1 JASPAR yes 118374482
chr1 154957518 154957533 FOXP1 JASPAR yes 118374483
chr1 154957518 154957539 IRF1 JASPAR yes 118374484
chr1 154957519 154957534 FOXP1 JASPAR yes 118374485
chr1 154957519 154957540 IRF1 JASPAR yes 118374486
chr1 154957520 154957535 FOXP1 JASPAR yes 118374487
chr1 154957520 154957541 IRF1 JASPAR yes 118374488
chr1 154957521 154957536 FOXP1 JASPAR yes 118374489
chr1 154957522 154957537 FOXP1 JASPAR yes 118374490
chr1 154957523 154957538 FOXP1 JASPAR yes 118374491
chr1 154957524 154957539 FOXP1 JASPAR yes 118374492
chr1 154957525 154957540 FOXP1 JASPAR yes 118374493
chr1 154957526 154957541 FOXP1 JASPAR yes 118374494
chr1 154957527 154957542 FOXP1 JASPAR yes 118374495
chr1 154957528 154957543 FOXP1 JASPAR yes 118374496
chr1 154957601 154957609 TBX5 JASPAR yes 118374497
chr1 154957613 154957621 RHOXF1 JASPAR yes 118374498
SNP sites on vista3405[chr1:154957258-154957622]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 154957332 rs373510125 A C,G
MYB PKNOX1 PKNOX2 TGIF1 TGIF2
642211
chr1 154957342 rs140180181 C T no 642212
chr1 154957364 rs115017509 A G no 642213
Genes possibly regulated by vista3405[chr1:154957258-154957622]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 0.58 1.0 1308 52209
chr1 154916552 154928599 - PBXIP1 ENSG00000163346.12 154928599 0.66 1.0 1309 71341
chr1 154929502 154936329 - PYGO2 ENSG00000163348.3 154936329 0.62 0.99 1310 79071
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 0.76 1.0 1311 89613
chr1 154947129 154951725 + CKS1B ENSG00000173207.8 154947129 0.93 0.99 1312 89871
chr1 154955814 154965587 + FLAD1 ENSG00000160688.14 154955814 0.78 1.0 1313 98556
chr1 154966062 154966791 + LENEP ENSG00000163352.5 154966062 0.82 1.0 1314 91560
chr1 154975127 154990998 + ZBTB7B ENSG00000160685.9 154975127 0.68 1.0 1315 82495
chr1 154990996 155006257 - DCST2 ENSG00000163354.10 155006257 0.79 1.0 1316 51365
chr1 155006300 155023406 + DCST1 ENSG00000163357.6 155006300 0.78 1.0 1317 51322
chr1 155023042 155035252 + ADAM15 ENSG00000143537.9 155023042 0.65 1.0 1318 34580
chr1 155036207 155042029 + EFNA4 ENSG00000243364.3 155036207 0.64 0.99 1319 21415
chr1 155036224 155059283 + EFNA3 ENSG00000251246.1 155036224 1.0 0.88 1321 21398
chr1 155036224 155060014 + EFNA3 ENSG00000143590.9 155036224 0.86 1.0 1320 21398
Expression level of Genes
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miRNAs possibly regulated by vista3405[chr1:154957258-154957622]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results